RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA798511" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA798511 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29548461 29548461 PRJNA798511_P_NODE_65190_length_302_cov_1.222707_g60924_i0 PRJNA798511 65190 302 1.222707 3.69257514 Cucumispora dikerogammari 658444 Fungi Fungi 46.2 0.00421   NR KAF7685156.1 658444 g60924 i0 46.3 1.63907284768212 54 29 53.6 0 58 219 131 184 KAF7685156.1 RNA-directed DNA polymerase from mobile element jockey, partial [Cucumispora dikerogammari] diamond 495 46.2 1 Eukaryota Opisthokonta Fungi Microsporidia       Cucumispora Cucumispora dikerogammari
32709106 32709106 PRJNA798511_P_NODE_50200_length_356_cov_1.466431_g45934_i0 PRJNA798511 50200 356 1.466431 5.22049436 Vairimorpha ceranae 40302 Fungi Fungi 44.3 0.0383   NR XP_024331809.1 40302 g45934 i0 37 0.455056179775281 54 34 45.5 0 163 2 754 807 XP_024331809.1 transcription initiation factor tfiid subunit taf1 [Vairimorpha ceranae] diamond 162 44.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;