RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where bioproject = "PRJNA798511", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 7 ✖

tax_kingdom 1

  • Bacillati · 7 ✖

bioproject 1

  • PRJNA798511 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10994322 10994322 PRJNA798511_P_NODE_36029_length_459_cov_1.805699_g31770_i0 PRJNA798511 36029 459 1.805699 8.28815841 Anaerolineae bacterium 2052143 Bacteria Bacteria 185 3.56e-57   NR MFO7743059.1 2052143 g31770 i0 90.1 0.660130718954248 101 10 66 0 306 4 52 152 MFO7743059.1 reverse transcriptase domain-containing protein [Anaerolineae bacterium] diamond 303 185 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
26736997 26736997 PRJNA798511_P_NODE_68501_length_293_cov_1.313636_g64235_i0 PRJNA798511 68501 293 1.313636 3.84895348 Anaerolineae bacterium 2052143 Bacteria Bacteria 168 1.89e-51   NR MFO7743059.1 2052143 g64235 i0 87.9 0.931740614334471 91 11 93.2 0 21 293 1 91 MFO7743059.1 reverse transcriptase domain-containing protein [Anaerolineae bacterium] diamond 273 168 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
27843485 27843485 PRJNA798511_P_NODE_73444_length_281_cov_1.168269_g69178_i0 PRJNA798511 73444 281 1.168269 3.28283589 Anaerolineae bacterium 2052143 Bacteria Bacteria 173 1.68e-53   NR MFO7743059.1 2052143 g69178 i0 91.4 0.99288256227758 93 8 99.3 0 1 279 15 107 MFO7743059.1 reverse transcriptase domain-containing protein [Anaerolineae bacterium] diamond 279 173 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28001682 28001682 PRJNA798511_P_NODE_68425_length_293_cov_1.400000_g64159_i0 PRJNA798511 68425 293 1.4 4.102 Anaerolineae bacterium 2052143 Bacteria Bacteria 170 4.66e-52   NR MFO7743059.1 2052143 g64159 i0 85.4 0.982935153583618 96 14 98.3 0 6 293 57 152 MFO7743059.1 reverse transcriptase domain-containing protein [Anaerolineae bacterium] diamond 288 170 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
28010806 28010806 PRJNA798511_P_NODE_3145_length_3095_cov_10.516545_g2385_i0 PRJNA798511 3145 3095 10.516545 325.48706775 Bacillati 1783272 Bacteria Bacteria 75.9 6.11e-10   NR MCP4356419.1 2026724 g2385 i0 23.1 1.33473344103393 516 308 47.4 21 2266 800 53 506 MCP4356419.1 ATP-binding domain-containing protein [Chloroflexota bacterium] diamond 4131 76.6 0.990861618798956 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30148534 30148534 PRJNA798511_P_NODE_53472_length_341_cov_1.361940_g49206_i0 PRJNA798511 53472 341 1.36194 4.6442154 Chloroflexota bacterium 2026724 Bacteria Bacteria 52 6.5e-5   NR MEC9321195.1 2026724 g49206 i0 39.3 0.536656891495601 61 37 53.7 0 306 124 601 661 MEC9321195.1 reverse transcriptase domain-containing protein [Chloroflexota bacterium] diamond 183 52 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31728996 31728996 PRJNA798511_P_NODE_88197_length_251_cov_0.865169_g83931_i0 PRJNA798511 88197 251 0.865169 2.17157419 Chloroflexota bacterium 2026724 Bacteria Bacteria 40 0.0333   NR MEP7134160.1 2026724 g83931 i0 44.4 0.430278884462151 36 20 43 0 129 236 3 38 MEP7134160.1 hypothetical protein [Chloroflexota bacterium] diamond 108 40 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;