contig_metadata
16 rows where bioproject = "PRJNA798511", tax_kingdom = "Bacillati" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 789611 | 789611 | PRJNA798511_P_NODE_102981_length_241_cov_0.916667_g98715_i0 | PRJNA798511 | 102981 | 241 | 0.916667 | 2.20916747 | Mycobacteroides salmoniphilum | 404941 | Bacteria | Bacteria | 390 | 4.05e-104 | NTclustered | gi|1626698579|gb|CP024633.1| | 404941 | g98715 | i0 | 95.851 | 14.7966804979253 | 241 | 10 | 100 | 0 | 1 | 241 | 3054817 | 3055057 | Mycobacteroides salmoniphilum strain DSM 43276 chromosome | blastn | 3566 | 390 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacteroides | Mycobacteroides salmoniphilum | ||
| 3342342 | 3342342 | PRJNA798511_P_NODE_97323_length_245_cov_0.895349_g93057_i0 | PRJNA798511 | 97323 | 245 | 0.895349 | 2.19360505 | Corynebacterium accolens | 38284 | Bacteria | Bacteria | 305 | 1.54e-78 | NTclustered | gi|2550484788|gb|CP100380.1| | 38284 | g93057 | i0 | 89.431 | 25.0530612244898 | 246 | 21 | 99 | 4 | 1 | 243 | 1386880 | 1387123 | Corynebacterium accolens strain CA3 chromosome | blastn | 6138 | 305 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium accolens | ||
| 10994553 | 10994553 | PRJNA798511_P_NODE_47229_length_371_cov_2.902685_g42963_i0 | PRJNA798511 | 47229 | 371 | 2.902685 | 10.76896135 | Rothia dentocariosa | 2047 | Bacteria | Bacteria | 52.8 | 0.035 | NTclustered | gi|2894503601|gb|CP178332.1| | 2047 | g42963 | i0 | 96.875 | 0.0862533692722372 | 32 | 0 | 9 | 1 | 138 | 169 | 1169337 | 1169367 | Rothia dentocariosa strain SOSUI018 chromosome, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia dentocariosa | ||
| 17369667 | 17369667 | PRJNA798511_P_NODE_95594_length_246_cov_0.890173_g91328_i0 | PRJNA798511 | 95594 | 246 | 0.890173 | 2.18982558 | Schaalia sp. HMT-877 | 3059029 | Bacteria | Bacteria | 117 | 7.77e-22 | NTclustered | gi|2557565758|gb|CP130059.1| | 3059029 | g91328 | i0 | 85.088 | 0.463414634146341 | 114 | 17 | 46 | 0 | 133 | 246 | 327598 | 327711 | Schaalia sp. HMT-877 strain F0543 chromosome, complete genome | blastn | 114 | 117 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Schaalia | Schaalia sp. HMT-877 | ||
| 17795416 | 17795416 | PRJNA798511_P_NODE_103234_length_241_cov_0.916667_g98968_i0 | PRJNA798511 | 103234 | 241 | 0.916667 | 2.20916747 | Cutibacterium | 1912216 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g98968 | i0 | 100 | 56.7344398340249 | 241 | 0 | 100 | 0 | 1 | 241 | 1553996 | 1554236 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 13673 | 446 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 21193626 | 21193626 | PRJNA798511_P_NODE_88497_length_251_cov_0.865169_g84231_i0 | PRJNA798511 | 88497 | 251 | 0.865169 | 2.17157419 | Actinomycetes | 1760 | Bacteria | Bacteria | 113 | 7.030000000000001e-27 | NR | WP_218026015.1 | 282684 | g84231 | i0 | 70.2 | 38.4262948207171 | 84 | 24 | 99.2 | 1 | 1 | 249 | 1895 | 1978 | WP_218026015.1 SDR family NAD(P)-dependent oxidoreductase [Nocardia miyunensis] | diamond | 9645 | 113 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Nocardia | Nocardia miyunensis | ||
| 22895300 | 22895300 | PRJNA798511_P_NODE_36238_length_457_cov_1.375000_g31979_i0 | PRJNA798511 | 36238 | 457 | 1.375 | 6.28375 | Gardnerella | 2701 | Bacteria | Bacteria | 52.8 | 0.044 | NTclustered | gi|2769796964|gb|CP160093.1| | 2702 | g31979 | i0 | 100 | 0.12253829321663 | 28 | 0 | 6 | 0 | 159 | 186 | 1116982 | 1116955 | Gardnerella vaginalis strain 1683_1263_1_CBA4 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Gardnerella | Gardnerella vaginalis | ||
| 27654370 | 27654370 | PRJNA798511_P_NODE_53544_length_341_cov_1.059701_g49278_i0 | PRJNA798511 | 53544 | 341 | 1.059701 | 3.61358041 | Solirubrobacteraceae bacterium | 2586742 | Bacteria | Bacteria | 46.2 | 0.00581 | NR | HZO36794.1 | 2586742 | g49278 | i0 | 37.3 | 1.63636363636364 | 75 | 41 | 60.7 | 1 | 24 | 230 | 5 | 79 | HZO36794.1 DsbA family oxidoreductase [Solirubrobacteraceae bacterium] | diamond | 558 | 46.2 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Solirubrobacteraceae | Solirubrobacteraceae bacterium | |||
| 29138447 | 29138447 | PRJNA798511_P_NODE_91909_length_248_cov_1.760000_g87643_i0 | PRJNA798511 | 91909 | 248 | 1.76 | 4.3648 | Nonomuraea spiralis | 46182 | Bacteria | Bacteria | 43.1 | 0.0273 | NR | WP_189649627.1 | 46182 | g87643 | i0 | 42.9 | 0.508064516129032 | 42 | 23 | 50.8 | 1 | 87 | 212 | 23 | 63 | WP_189649627.1 aldo/keto reductase [Nonomuraea spiralis] | diamond | 126 | 43.1 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Streptosporangiales | Streptosporangiaceae | Nonomuraea | Nonomuraea spiralis | ||
| 29201453 | 29201453 | PRJNA798511_P_NODE_104409_length_232_cov_2.094340_g100143_i0 | PRJNA798511 | 104409 | 232 | 2.09434 | 4.8588688 | Pseudonocardiales bacterium | 2201155 | Bacteria | Bacteria | 82.8 | 1.42e-18 | NR | PZS03413.1 | 2201155 | g100143 | i0 | 53.7 | 1.82327586206897 | 67 | 30 | 85.3 | 1 | 14 | 211 | 13 | 79 | PZS03413.1 MAG: hypothetical protein DLM56_09360 [Pseudonocardiales bacterium] | diamond | 423 | 82.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiales bacterium | ||||
| 29233038 | 29233038 | PRJNA798511_P_NODE_55889_length_332_cov_1.189189_g51623_i0 | PRJNA798511 | 55889 | 332 | 1.189189 | 3.94810748 | Blastococcus sp. Marseille-P5729 | 2086582 | Bacteria | Bacteria | 47.8 | 0.00145 | NR | WP_106850528.1 | 2086582 | g51623 | i0 | 36.4 | 0.596385542168675 | 66 | 40 | 57.8 | 1 | 279 | 88 | 124 | 189 | WP_106850528.1 respiratory nitrate reductase subunit gamma [Blastococcus sp. Marseille-P5729] | diamond | 198 | 47.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Geodermatophilales | Geodermatophilaceae | Blastococcus | Blastococcus sp. Marseille-P5729 | ||
| 29453589 | 29453589 | PRJNA798511_P_NODE_82430_length_261_cov_2.829787_g78164_i0 | PRJNA798511 | 82430 | 261 | 2.829787 | 7.38574407 | Mycobacterium simulans | 627089 | Bacteria | Bacteria | 42.7 | 0.0472 | NR | WP_191496213.1 | 627089 | g78164 | i0 | 31.6 | 0.873563218390805 | 76 | 51 | 87.4 | 1 | 229 | 2 | 761 | 835 | WP_191496213.1 type VII secretion protein EccCa [Mycobacterium simulans] | diamond | 228 | 42.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium simulans | ||
| 29896098 | 29896098 | PRJNA798511_P_NODE_30531_length_530_cov_6.733042_g26291_i0 | PRJNA798511 | 30531 | 530 | 6.733042 | 35.6851226 | Acidimicrobiales bacterium | 2201156 | Bacteria | Bacteria | 101 | 1.69e-23 | NR | HEX3946098.1 | 2201156 | g26291 | i0 | 33.3 | 1.83396226415094 | 162 | 102 | 91.1 | 3 | 486 | 4 | 6 | 162 | HEX3946098.1 hemerythrin domain-containing protein [Acidimicrobiales bacterium] | diamond | 972 | 101 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Acidimicrobiales bacterium | ||||
| 30370344 | 30370344 | PRJNA798511_P_NODE_59472_length_319_cov_1.991870_g55206_i0 | PRJNA798511 | 59472 | 319 | 1.99187 | 6.3540653 | Kutzneria chonburiensis | 1483604 | Bacteria | Bacteria | 76.6 | 1.4e-14 | NR | WP_273938474.1 | 1483604 | g55206 | i0 | 48.8 | 1.5141065830721 | 80 | 41 | 75.2 | 0 | 42 | 281 | 103 | 182 | WP_273938474.1 ATP-dependent Clp protease proteolytic subunit [Kutzneria chonburiensis] | diamond | 483 | 76.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Pseudonocardiales | Pseudonocardiaceae | Kutzneria | Kutzneria chonburiensis | ||
| 30685706 | 30685706 | PRJNA798511_P_NODE_37713_length_441_cov_5.796196_g33453_i0 | PRJNA798511 | 37713 | 441 | 5.796196 | 25.56122436 | Rubrobacter sp. | 2036010 | Bacteria | Bacteria | 101 | 2.9e-24 | NR | HET7270448.1 | 2036010 | g33453 | i0 | 43.8 | 3.73469387755102 | 121 | 68 | 82.3 | 0 | 363 | 1 | 26 | 146 | HET7270448.1 Hsp20/alpha crystallin family protein [Rubrobacter sp.] | diamond | 1647 | 101 | 1 | Bacteria | Bacillati | Actinomycetota | Rubrobacteria | Rubrobacterales | Rubrobacteraceae | Rubrobacter | Rubrobacter sp. | ||
| 31231870 | 31231870 | PRJNA798511_P_NODE_95595_length_246_cov_0.890173_g91329_i0 | PRJNA798511 | 95595 | 246 | 0.890173 | 2.18982558 | Streptomyces | 1883 | Bacteria | Bacteria | 42.7 | 0.0166 | NR | WP_127828415.1 | 1883 | g91329 | i0 | 52.3 | 4.32926829268293 | 44 | 19 | 51.2 | 1 | 34 | 159 | 48 | 91 | WP_127828415.1 MULTISPECIES: DUF742 domain-containing protein [Streptomyces] | diamond | 1065 | 43.1 | 0.990719257540603 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;