RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA798511", tax_clade = "Sar" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA798511 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27054015 27054015 PRJNA798511_P_NODE_28562_length_562_cov_2.511247_g24334_i0 PRJNA798511 28562 562 2.511247 14.11320814 Paramarteilia canceri 2844372 SAR_Eukaryotes SAR_Eukaryotes 49.7 4.74e-4   NR MES1902539.1 2844372 g24334 i0 45.8 0.256227758007117 48 26 25.6 0 260 403 84 131 MES1902539.1 hypothetical protein [Paramarteilia canceri] diamond 144 49.7 1 Eukaryota Sar   Endomyxa Ascetosporea Paramyxida Marteiliidae Paramarteilia Paramarteilia canceri
31887193 31887193 PRJNA798511_P_NODE_89677_length_250_cov_0.870056_g85411_i0 PRJNA798511 89677 250 0.870056 2.17514 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 79 3.3e-15   NR SPR01615.1 37360 g85411 i0 69.4 1.176 49 15 58.8 0 147 1 104 152 SPR01615.1 unnamed protein product [Plasmodiophora brassicae] diamond 294 79 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;