contig_metadata
14 rows where bioproject = "PRJNA798511" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3340685 | 3340685 | PRJNA798511_P_NODE_10923_length_1428_cov_9.009594_g8279_i0 | PRJNA798511 | 10923 | 1428 | 9.009594 | 128.65700232 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 56.5 | 0.011 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g8279 | i0 | 100 | 0.061624649859944 | 30 | 0 | 2 | 0 | 54 | 83 | 1852363 | 1852334 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 88 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 26927371 | 26927371 | PRJNA798511_P_NODE_47302_length_371_cov_1.419463_g43036_i0 | PRJNA798511 | 47302 | 371 | 1.419463 | 5.26620773 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 44.3 | 0.0403 | NR | MEL0005672.1 | 2026772 | g43036 | i0 | 44.1 | 0.549865229110512 | 68 | 32 | 51.8 | 4 | 300 | 109 | 111 | 176 | MEL0005672.1 substrate-binding domain-containing protein [Opitutales bacterium] | diamond | 204 | 44.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 27527847 | 27527847 | PRJNA798511_P_NODE_35703_length_463_cov_1.753846_g31444_i0 | PRJNA798511 | 35703 | 463 | 1.753846 | 8.12030698 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 68.9 | 3.35e-11 | NR | HET6328477.1 | 2026779 | g31444 | i0 | 31.4 | 0.764578833693304 | 118 | 74 | 75.2 | 3 | 94 | 441 | 36 | 148 | HET6328477.1 hypothetical protein [Planctomycetaceae bacterium] | diamond | 354 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 28033221 | 28033221 | PRJNA798511_P_NODE_37945_length_439_cov_1.754098_g33684_i0 | PRJNA798511 | 37945 | 439 | 1.754098 | 7.70049022 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 80.5 | 9.36e-15 | NR | HEY3226600.1 | 2026780 | g33684 | i0 | 45.1 | 6.10250569476082 | 102 | 46 | 68.3 | 3 | 432 | 133 | 165 | 258 | HEY3226600.1 serine/threonine-protein kinase [Planctomycetota bacterium] | diamond | 2679 | 80.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 28033244 | 28033244 | PRJNA798511_P_NODE_78865_length_269_cov_1.464286_g74599_i0 | PRJNA798511 | 78865 | 269 | 1.464286 | 3.93892934 | Lentisphaerota bacterium | 1932692 | Bacteria | Bacteria | 42.7 | 0.0457 | NR | MBE6399572.1 | 1932692 | g74599 | i0 | 42.9 | 0.468401486988848 | 42 | 23 | 45.7 | 1 | 206 | 84 | 193 | 234 | MBE6399572.1 FtsQ-type POTRA domain-containing protein [Lentisphaerota bacterium] | diamond | 126 | 42.7 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaerota bacterium | |||||
| 28664612 | 28664612 | PRJNA798511_P_NODE_35047_length_471_cov_1.092965_g30788_i0 | PRJNA798511 | 35047 | 471 | 1.092965 | 5.14786515 | Candidatus Scalindua sp. | 2268189 | Bacteria | Bacteria | 145 | 4.359999999999999e-37 | NR | MCP4255696.1 | 2268189 | g30788 | i0 | 44.9 | 1.72611464968153 | 158 | 81 | 96.8 | 1 | 1 | 456 | 627 | 784 | MCP4255696.1 hypothetical protein [Candidatus Scalindua sp.] | diamond | 813 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Scalinduaceae | Candidatus Scalindua | Candidatus Scalindua sp. | |
| 28980475 | 28980475 | PRJNA798511_P_NODE_10888_length_1432_cov_35.709345_g8254_i0 | PRJNA798511 | 10888 | 1432 | 35.709345 | 511.3578204 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 99.4 | 5.62e-20 | NR | MFH0952965.1 | 2026799 | g8254 | i0 | 44.4 | 0.207402234636872 | 99 | 54 | 20.7 | 1 | 783 | 487 | 104 | 201 | MFH0952965.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Verrucomicrobiota bacterium] | diamond | 297 | 99.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29368294 | 29368294 | PRJNA798511_P_NODE_10889_length_1432_cov_30.951435_g8254_i1 | PRJNA798511 | 10889 | 1432 | 30.951435 | 443.2245492 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 89.7 | 1.02e-16 | NR | HLX63275.1 | 2026780 | g8254 | i1 | 46.2 | 1.37849162011173 | 93 | 49 | 19.5 | 1 | 650 | 928 | 99 | 190 | HLX63275.1 ATP-dependent Clp protease proteolytic subunit [Planctomycetota bacterium] | diamond | 1974 | 89.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 30338759 | 30338759 | PRJNA798511_P_NODE_82892_length_261_cov_0.819149_g78626_i0 | PRJNA798511 | 82892 | 261 | 0.819149 | 2.13797889 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 68.9 | 4.24e-12 | NR | MBT3191068.1 | 2026799 | g78626 | i0 | 38.4 | 8.45977011494253 | 86 | 52 | 98.9 | 1 | 259 | 2 | 101 | 185 | MBT3191068.1 ATP-dependent Clp protease proteolytic subunit [Verrucomicrobiota bacterium] | diamond | 2208 | 68.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30622513 | 30622513 | PRJNA798511_P_NODE_73453_length_281_cov_1.120192_g69187_i0 | PRJNA798511 | 73453 | 281 | 1.120192 | 3.14773952 | Aquisphaera insulae | 2712864 | Bacteria | Bacteria | 42 | 0.0443 | NR | WP_165228110.1 | 2712864 | g69187 | i0 | 31.6 | 0.843416370106762 | 79 | 53 | 84.3 | 1 | 21 | 257 | 6 | 83 | WP_165228110.1 hypothetical protein [Aquisphaera insulae] | diamond | 237 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Aquisphaera | Aquisphaera insulae | |
| 30812150 | 30812150 | PRJNA798511_P_NODE_14574_length_1103_cov_32.100971_g8254_i2 | PRJNA798511 | 14574 | 1103 | 32.100971 | 354.07371013 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 81.3 | 6.59e-14 | NR | MFH0952965.1 | 2026799 | g8254 | i2 | 42.4 | 0.677243880326383 | 85 | 48 | 23.1 | 1 | 741 | 487 | 118 | 201 | MFH0952965.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Verrucomicrobiota bacterium] | diamond | 747 | 81.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32045544 | 32045544 | PRJNA798511_P_NODE_97198_length_245_cov_0.895349_g92932_i0 | PRJNA798511 | 97198 | 245 | 0.895349 | 2.19360505 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 60.5 | 1.59e-8 | NR | MBV8129076.1 | 2026779 | g92932 | i0 | 66.7 | 0.514285714285714 | 42 | 14 | 51.4 | 0 | 118 | 243 | 1 | 42 | MBV8129076.1 ABC transporter permease [Planctomycetaceae bacterium] | diamond | 126 | 60.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 32740830 | 32740830 | PRJNA798511_P_NODE_63060_length_308_cov_1.348936_g58794_i0 | PRJNA798511 | 63060 | 308 | 1.348936 | 4.15472288 | Candidatus Omnitrophota bacterium | 2035772 | Bacteria | Bacteria | 90.5 | 1.27e-18 | NR | MCG8432081.1 | 2035772 | g58794 | i0 | 41 | 10.5194805194805 | 100 | 59 | 97.4 | 0 | 307 | 8 | 138 | 237 | MCG8432081.1 reverse transcriptase family protein [Candidatus Omnitrophota bacterium] | diamond | 3240 | 90.5 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 32835075 | 32835075 | PRJNA798511_P_NODE_49180_length_361_cov_1.829861_g44914_i0 | PRJNA798511 | 49180 | 361 | 1.829861 | 6.60579821 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 48.5 | 0.00133 | NR | HEU5068864.1 | 2499141 | g44914 | i0 | 37.7 | 0.506925207756233 | 61 | 29 | 44 | 3 | 229 | 71 | 517 | 576 | HEU5068864.1 MFS transporter [Verrucomicrobiia bacterium] | diamond | 183 | 48.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;