RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA798511", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA798511 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18641969 18641969 PRJNA798511_P_NODE_40935_length_413_cov_1.700000_g36672_i0 PRJNA798511 40935 413 1.7 7.021 Ignavibacterium album 591197 Bacteria Bacteria 52.8 0.04   NTclustered gi|383800634|gb|CP003418.1| 945713 g36672 i0 100 0.0677966101694915 28 0 7 0 155 182 2848532 2848505 Ignavibacterium album JCM 16511, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium album
28475165 28475165 PRJNA798511_P_NODE_61486_length_313_cov_1.254167_g57220_i0 PRJNA798511 61486 313 1.254167 3.92554271 Rosettibacter firmus 3111522 Bacteria Bacteria 71.2 4.19e-13   NR WP_353680235.1 3111522 g57220 i0 44.7 0.728434504792332 76 40 70.9 1 63 284 32 107 WP_353680235.1 Hsp20/alpha crystallin family protein [Rosettibacter firmus] diamond 228 71.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae Rosettibacter Rosettibacter firmus
30465082 30465082 PRJNA798511_P_NODE_79233_length_268_cov_1.610256_g74967_i0 PRJNA798511 79233 268 1.610256 4.31548608 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 43.1 0.0369   NR MDR3625286.1 2651163 g74967 i0 34.5 0.649253731343284 58 38 64.9 0 246 73 216 273 MDR3625286.1 PHP domain-containing protein [Ignavibacteriaceae bacterium] diamond 174 43.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium
32172229 32172229 PRJNA798511_P_NODE_44058_length_391_cov_0.968553_g39794_i0 PRJNA798511 44058 391 0.968553 3.78704223 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 43.9 0.0331   NR HPD66887.1 2049428 g39794 i0 41.7 0.460358056265985 60 35 46 0 21 200 79 138 HPD66887.1 hypothetical protein [Ignavibacteriales bacterium] diamond 180 43.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;