RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA798511", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 2 ✖

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA798511 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30559252 30559252 PRJNA798511_P_NODE_79293_length_268_cov_1.512821_g75027_i0 PRJNA798511 79293 268 1.512821 4.05436028 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 159 6.4899999999999996e-46   NR KNH08151.1 1314962 g75027 i0 80.9 0.996268656716418 89 17 99.6 0 267 1 140 228 KNH08151.1 mitochondrial ADP/ATP translocase [Perkinsela sp. CCAP 1560/4] diamond 267 159 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
31042807 31042807 PRJNA798511_P_NODE_93055_length_248_cov_0.880000_g88789_i0 PRJNA798511 93055 248 0.88 2.1824 Trypanosoma 5690 Euglenozoa other_Eukaryota 50.4 7.74e-5   NR KAH8618341.1 5699 g88789 i0 51 1.23387096774194 51 25 61.7 0 194 42 310 360 KAH8618341.1 putative Reverse transcriptase (RNA dependent DNA polymerase) [Trypanosoma vivax] diamond 306 50.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;