RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA797655" and tax_phylum = "Nitrososphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA797655 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9711428 9711428 PRJNA797655_S_NODE_150668_length_206_cov_0.883436_g150063_i0 PRJNA797655 150668 206 0.883436 1.81987816 Candidatus Nitrosotenuis chungbukensis 1353246 Archaea Archaea 52.8 0.018   NTclustered gi|2551106379|gb|CP130341.1| 1353246 g150063 i0 100 0.135922330097087 28 0 14 0 102 129 324744 324771 Candidatus Nitrosotenuis chungbukensis strain MY2 chromosome, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis chungbukensis
29706049 29706049 PRJNA797655_S_NODE_169710_length_194_cov_1.907285_g169105_i0 PRJNA797655 169710 194 1.907285 3.7001329 Nitrososphaerales archaeon 2268197 Archaea Archaea 42.4 0.0223   NR MFI5407148.1 2268197 g169105 i0 37 0.835051546391753 54 31 78.9 1 163 11 121 174 MFI5407148.1 helix-turn-helix domain-containing protein [Nitrososphaerales archaeon] diamond 162 42.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales     Nitrososphaerales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;