contig_metadata
5 rows where bioproject = "PRJNA797655" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 784163 | 784163 | PRJNA797655_S_NODE_18321_length_424_cov_2.640420_g17727_i0 | PRJNA797655 | 18321 | 424 | 2.64042 | 11.1953808 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 422 | 2.6999999999999994e-113 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g17727 | i0 | 86.064 | 95.3561320754717 | 409 | 37 | 94 | 16 | 1 | 397 | 3485838 | 3486238 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 40431 | 422 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 26832438 | 26832438 | PRJNA797655_S_NODE_166661_length_196_cov_1.287582_g166056_i0 | PRJNA797655 | 166661 | 196 | 1.287582 | 2.52366072 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 41.2 | 0.049 | NR | HKV75774.1 | 2448054 | g166056 | i0 | 38.2 | 0.841836734693878 | 55 | 33 | 84.2 | 1 | 31 | 195 | 72 | 125 | HKV75774.1 hypothetical protein [Gemmatimonadales bacterium] | diamond | 165 | 41.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 28412021 | 28412021 | PRJNA797655_S_NODE_145226_length_209_cov_2.024096_g144621_i0 | PRJNA797655 | 145226 | 209 | 2.024096 | 4.23036064 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 39.7 | 0.0429 | NR | PYO16808.1 | 2026742 | g144621 | i0 | 45.9 | 1.0622009569378 | 37 | 20 | 53.1 | 0 | 136 | 26 | 16 | 52 | PYO16808.1 MAG: hypothetical protein DMD31_01620 [Gemmatimonadota bacterium] | diamond | 222 | 39.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 31697396 | 31697396 | PRJNA797655_S_NODE_127397_length_222_cov_1.877095_g126792_i0 | PRJNA797655 | 127397 | 222 | 1.877095 | 4.1671509 | Gemmatimonas sp. SM23_52 | 1703359 | Bacteria | Bacteria | 42.4 | 0.038 | NR | KPK79791.1 | 1703359 | g126792 | i0 | 50 | 0.621621621621622 | 46 | 23 | 62.2 | 0 | 190 | 53 | 194 | 239 | KPK79791.1 MAG: hypothetical protein AMS25_11430 [Gemmatimonas sp. SM23_52] | diamond | 138 | 42.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas sp. SM23_52 | |
| 32456900 | 32456900 | PRJNA797655_S_NODE_176519_length_190_cov_2.782313_g175914_i0 | PRJNA797655 | 176519 | 190 | 2.782313 | 5.2863947 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 41.2 | 0.0382 | NR | HEX4628716.1 | 2448054 | g175914 | i0 | 34.6 | 0.821052631578947 | 52 | 33 | 80.5 | 1 | 189 | 37 | 12 | 63 | HEX4628716.1 cytochrome d ubiquinol oxidase subunit II [Gemmatimonadales bacterium] | diamond | 156 | 41.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;