RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA797655" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA797655 · 8 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26673718 26673718 PRJNA797655_S_NODE_169361_length_194_cov_2.470199_g168756_i0 PRJNA797655 169361 194 2.470199 4.79218606 Chloroflexota bacterium 2026724 Bacteria Bacteria 61.6 1.74e-9   NR MBM25826.1 2026724 g168756 i0 49.1 0.881443298969072 57 29 88.1 0 186 16 75 131 MBM25826.1 hypothetical protein [Chloroflexota bacterium] diamond 171 61.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27401686 27401686 PRJNA797655_S_NODE_112743_length_234_cov_2.261780_g112138_i0 PRJNA797655 112743 234 2.26178 5.2925652 Anaerolineales bacterium 2073117 Bacteria Bacteria 44.3 0.00927   NR MCB0012343.1 2073117 g112138 i0 47.1 0.435897435897436 34 18 43.6 0 58 159 230 263 MCB0012343.1 anti-sigma factor [Anaerolineales bacterium] diamond 102 44.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
29579894 29579894 PRJNA797655_S_NODE_178870_length_189_cov_1.972603_g178265_i0 PRJNA797655 178870 189 1.972603 3.72821967 Caldilinea sp. 2293560 Bacteria Bacteria 41.6 0.0441   NR MFM7581791.1 2293560 g178265 i0 36.5 1 63 39 100 1 189 1 17 78 MFM7581791.1 right-handed parallel beta-helix repeat-containing protein [Caldilinea sp.] diamond 189 41.6 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae Caldilinea Caldilinea sp.
29927732 29927732 PRJNA797655_S_NODE_61631_length_294_cov_1.338645_g61026_i0 PRJNA797655 61631 294 1.338645 3.9356163 Chloroflexota bacterium 2026724 Bacteria Bacteria 61.6 2.95e-9   NR MBM26495.1 2026724 g61026 i0 50 0.755102040816326 74 33 75.5 3 22 243 60 129 MBM26495.1 hypothetical protein [Chloroflexota bacterium] diamond 222 61.6 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30622474 30622474 PRJNA797655_S_NODE_179573_length_189_cov_1.315068_g178968_i0 PRJNA797655 179573 189 1.315068 2.48547852 Anaerolineaceae bacterium oral taxon 439 1889813 Bacteria Bacteria 42.7 0.00352   NR AOH43201.1 1889813 g178968 i0 32.1 0.888888888888889 56 38 88.9 0 13 180 1 56 AOH43201.1 hypothetical protein BEQ56_06755 [Anaerolineaceae bacterium oral taxon 439] diamond 168 42.7 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium oral taxon 439
31317827 31317827 PRJNA797655_S_NODE_83795_length_263_cov_2.686364_g83190_i0 PRJNA797655 83795 263 2.686364 7.06513732 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 43.1 0.034   NR MFN8615601.1 2026734 g83190 i0 53.1 0.365019011406844 32 15 36.5 0 135 230 444 475 MFN8615601.1 4-alpha-glucanotransferase [Dehalococcoidia bacterium] diamond 96 43.1 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
31728939 31728939 PRJNA797655_S_NODE_171497_length_193_cov_1.920000_g170892_i0 PRJNA797655 171497 193 1.92 3.7056 Chloroflexota bacterium 2026724 Bacteria Bacteria 44.3 0.00564   NR MYC02874.1 2026724 g170892 i0 31.7 0.932642487046632 60 34 82.4 1 34 192 594 653 MYC02874.1 hypothetical protein [Chloroflexota bacterium] diamond 180 44.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31728944 31728944 PRJNA797655_S_NODE_226137_length_167_cov_2.322581_g225532_i0 PRJNA797655 226137 167 2.322581 3.87871027 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.1 0.00951   NR NLE52106.1 2026724 g225532 i0 58.6 0.520958083832335 29 12 52.1 0 13 99 4 32 NLE52106.1 hypothetical protein [Chloroflexota bacterium] diamond 87 43.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;