RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA797655" and tax_phylum = "Bacillariophyta"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA797655 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9712888 9712888 PRJNA797655_S_NODE_198028_length_180_cov_1.051095_g197423_i0 PRJNA797655 198028 180 1.051095 1.891971 Pseudo-nitzschia pungens 37318 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|2846854574|gb|PQ459335.1| 37318 g197423 i0 100 0.311111111111111 28 0 16 0 9 36 17570 17597 Pseudo-nitzschia pungens isolate CNS00055 mitochondrion, complete genome blastn 56 52.8 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Pseudo-nitzschia Pseudo-nitzschia pungens
30022461 30022461 PRJNA797655_S_NODE_142931_length_211_cov_1.142857_g142326_i0 PRJNA797655 142931 211 1.142857 2.41142827 Seminavis robusta 568900 SAR_Eukaryotes SAR_Eukaryotes 42.4 0.0338   NR CAB9509238.1 568900 g142326 i0 35.4 0.682464454976303 48 31 68.2 0 43 186 50 97 CAB9509238.1 Coronin-1B [Seminavis robusta] diamond 144 42.4 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Seminavis Seminavis robusta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;