RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA797655", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 1 ✖

tax_kingdom 1

  • Shotokuvirae · 1 ✖

bioproject 1

  • PRJNA797655 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4614091 4614091 PRJNA797655_S_NODE_234844_length_164_cov_1.190083_g234239_i0 PRJNA797655 234844 164 1.190083 1.95173612 Red panda feces-associated circular DNA virus 15 2863968 Viruses Viruses 56.5 0.001   NTclustered gi|2099633188|gb|MZ556185.1| 2863968 g234239 i0 100 0.182926829268293 30 0 18 0 131 160 1800 1771 Red panda feces-associated circular DNA virus 15 isolate Rpf280cress02-12 genomic sequence blastn 30 56.5 1 Viruses   Shotokuvirae Cressdnaviricota         Red panda feces-associated circular DNA virus 15

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;