RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

169,406 rows where bioproject = "PRJNA797655" and tax_kingdom = "Metazoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Metazoa · 169,406 ✖

tax_clade 1

bioproject 1

  • PRJNA797655 · 169,406 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
781549 781549 PRJNA797655_S_NODE_10001_length_509_cov_7.087983_g9428_i0 PRJNA797655 10001 509 7.087983 36.07783347 Mus musculus 10090 Chordata Chordata 941 0   NTclustered gi|354794032|gb|JN958533.1| 10090 g9428 i0 100 3 509 0 100 0 1 509 1921 1413 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Ivns1abp:tm1e(EUCOMM)Wtsi; transgenic blastn 1527 941 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781550 781550 PRJNA797655_S_NODE_100021_length_246_cov_1.724138_g99416_i0 PRJNA797655 100021 246 1.724138 4.24137948 Mus musculus 10090 Chordata Chordata 455 1.4500000000000002e-123   NTclustered gi|25188965|gb|AC135608.7| 10090 g99416 i0 100 36.4634146341463 246 0 100 0 1 246 1845 2090 Mus musculus strain C57BL/6J clone rp23-408d14, complete sequence blastn 8970 455 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781551 781551 PRJNA797655_S_NODE_100061_length_246_cov_1.655172_g99456_i0 PRJNA797655 100061 246 1.655172 4.07172312 Bos mutus 72004 Chordata Chordata 211 3.46e-50   NTclustered gi|2868769065|ref|XR_011468043.1| 72004 g99456 i0 86.842 84.8983739837398 190 24 77 1 15 204 1529 1341 PREDICTED: Bos mutus LYR motif containing 9 (LYRM9), transcript variant X2, misc_RNA blastn 20885 211 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
781552 781552 PRJNA797655_S_NODE_100081_length_246_cov_1.655172_g99476_i0 PRJNA797655 100081 246 1.655172 4.07172312 Bos indicus 9915 Chordata Chordata 455 1.4500000000000002e-123   NTclustered gi|2878489693|ref|XM_019987542.2| 9915 g99476 i0 100 1.99593495934959 246 0 100 0 1 246 2062 2307 PREDICTED: Bos indicus RB associated KRAB zinc finger (RBAK), transcript variant X3, mRNA blastn 491 455 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
781554 781554 PRJNA797655_S_NODE_100121_length_246_cov_1.532020_g99516_i0 PRJNA797655 100121 246 1.53202 3.7687692 Mus musculus 10090 Chordata Chordata 455 1.4500000000000002e-123   NTclustered gi|22204525|emb|AL732539.6| 10090 g99516 i0 100 2 246 0 100 0 1 246 150990 151235 Mouse DNA sequence from clone RP23-255E6 on chromosome 11, complete sequence blastn 492 455 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781555 781555 PRJNA797655_S_NODE_100161_length_246_cov_1.418719_g99556_i0 PRJNA797655 100161 246 1.418719 3.49004874 Mus musculus 10090 Chordata Chordata 455 1.4500000000000002e-123   NTclustered gi|30142486|emb|AL954341.14| 10090 g99556 i0 100 2 246 0 100 0 1 246 163623 163868 Mouse DNA sequence from clone RP23-213D14 on chromosome 2, complete sequence blastn 492 455 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781556 781556 PRJNA797655_S_NODE_100181_length_246_cov_1.418719_g99576_i0 PRJNA797655 100181 246 1.418719 3.49004874 Mus musculus 10090 Chordata Chordata 455 1.4500000000000002e-123   NTclustered gi|67010244|gb|AC159894.2| 10090 g99576 i0 100 83.3780487804878 246 0 100 0 1 246 72909 73154 Mus musculus BAC clone RP23-296M10 from chromosome 9, complete sequence blastn 20511 455 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781557 781557 PRJNA797655_S_NODE_10021_length_509_cov_3.628755_g9448_i0 PRJNA797655 10021 509 3.628755 18.47036295 Mus musculus 10090 Chordata Chordata 941 0   NTclustered gi|45120168|gb|AC118540.15| 10090 g9448 i0 100 4.34970530451866 509 0 100 0 1 509 103080 102572 Mus musculus strain 129/SvJ clone mgs1-169d12 map 3, complete sequence blastn 2214 941 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781558 781558 PRJNA797655_S_NODE_100281_length_246_cov_0.906404_g99676_i0 PRJNA797655 100281 246 0.906404 2.22975384 Mus musculus 10090 Chordata Chordata 449 6.74e-122   NTclustered gi|23093263|emb|AL672076.10| 10090 g99676 i0 99.593 13.0325203252033 246 1 100 0 1 246 91689 91444 Mouse DNA sequence from clone RP23-161N17 on chromosome 4, complete sequence blastn 3206 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781559 781559 PRJNA797655_S_NODE_100301_length_245_cov_26.306931_g99696_i0 PRJNA797655 100301 245 26.306931 64.45198095 Mus musculus 10090 Chordata Chordata 448 2.41e-121   NTclustered gi|55831516|gb|AC117797.9| 10090 g99696 i0 99.592 121.224489795918 245 1 100 0 1 245 152723 152479 Mus musculus chromosome 19, clone RP24-555M16, complete sequence blastn 29700 448 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781560 781560 PRJNA797655_S_NODE_100321_length_245_cov_11.019802_g99716_i0 PRJNA797655 100321 245 11.019802 26.9985149 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|2553410569|ref|NG_219311.1| 10090 g99716 i0 100 59.4897959183673 245 0 100 0 1 245 86 330 Mus musculus STARR-seq mESC enhancer starr_30848 (LOC131379379) on chromosome 11 blastn 14575 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781561 781561 PRJNA797655_S_NODE_100341_length_245_cov_6.103960_g99736_i0 PRJNA797655 100341 245 6.10396 14.954702 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|54400831|gb|AC112964.8| 10090 g99736 i0 100 2 245 0 100 0 1 245 93358 93602 Mus musculus chromosome 8, clone RP24-82M4, complete sequence blastn 490 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781562 781562 PRJNA797655_S_NODE_100381_length_245_cov_4.420792_g99776_i0 PRJNA797655 100381 245 4.420792 10.8309404 Bos taurus 9913 Chordata Chordata 259 1.21e-64   NTclustered gi|1068294018|gb|KX592814.1| 9913 g99776 i0 86.122 210.914285714286 245 28 100 5 1 243 3916413 3916173 Bos taurus isolate Dominette_000065F genomic sequence blastn 51674 259 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781563 781563 PRJNA797655_S_NODE_10041_length_508_cov_32.589247_g9468_i0 PRJNA797655 10041 508 32.589247 165.55337476 Mus musculus 10090 Chordata Chordata 922 0   NTclustered gi|546231958|ref|NM_001101430.2| 10090 g9468 i0 99.409 81.9566929133858 508 3 100 0 1 508 67 574 Mus musculus proteasome (prosome, macropain) assembly chaperone 4 (Psmg4), transcript variant 2, mRNA blastn 41634 922 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781564 781564 PRJNA797655_S_NODE_100441_length_245_cov_3.792079_g99836_i0 PRJNA797655 100441 245 3.792079 9.29059355 Mus musculus 10090 Chordata Chordata 448 2.41e-121   NTclustered gi|1690553931|ref|NM_001364771.2| 10090 g99836 i0 99.592 4.34285714285714 245 1 100 0 1 245 679 923 Mus musculus phosphatidylinositol glycan anchor biosynthesis, class L (Pigl), transcript variant 2, mRNA blastn 1064 448 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781565 781565 PRJNA797655_S_NODE_100461_length_245_cov_3.549505_g99856_i0 PRJNA797655 100461 245 3.549505 8.69628725 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|74195060|dbj|AK147999.1| 10090 g99856 i0 100 61.930612244898 245 0 100 0 1 245 3109 2865 Mus musculus melanocyte cDNA, RIKEN full-length enriched library, clone:G270135O13 product:Similar to enigma homolog (R. norvegicus), full insert sequence blastn 15173 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781566 781566 PRJNA797655_S_NODE_100501_length_245_cov_3.198020_g99896_i0 PRJNA797655 100501 245 3.19802 7.835149 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|87299363|emb|CT009740.17| 10090 g99896 i0 100 13 245 0 100 0 1 245 120400 120156 Mouse DNA sequence from clone RP23-9N14 on chromosome 12, complete sequence blastn 3185 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781567 781567 PRJNA797655_S_NODE_100581_length_245_cov_2.851485_g99976_i0 PRJNA797655 100581 245 2.851485 6.98613825 Hippopotamus amphibius 9833 Chordata Chordata 115 2.7800000000000003e-21   NTclustered gi|2528717724|ref|XR_009055485.1| 575201 g99976 i0 88 3.19183673469388 100 9 40 3 30 128 632 729 PREDICTED: Hippopotamus amphibius kiboko thyroid hormone responsive (THRSP), transcript variant X7, misc_RNA blastn 782 115 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Hippopotamidae Hippopotamus Hippopotamus amphibius
781568 781568 PRJNA797655_S_NODE_100601_length_245_cov_2.762376_g99996_i0 PRJNA797655 100601 245 2.762376 6.7678212 Bos indicus 9915 Chordata Chordata 222 1.59e-53   NTclustered gi|2878379178|ref|XM_070800408.1| 9915 g99996 i0 87.692 329.4 195 19 79 5 30 222 14909 14718 PREDICTED: Bos indicus RAP2A, member of RAS oncogene family (RAP2A), transcript variant X1, mRNA blastn 80703 222 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
781569 781569 PRJNA797655_S_NODE_10061_length_508_cov_8.535484_g9488_i0 PRJNA797655 10061 508 8.535484 43.36025872 Mus musculus 10090 Chordata Chordata 939 0   NTclustered gi|354782986|gb|JN947487.1| 10090 g9488 i0 100 6.17125984251969 508 0 100 0 1 508 4393 4900 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Tmbim6:tm1a(EUCOMM)Hmgu; transgenic blastn 3135 939 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781570 781570 PRJNA797655_S_NODE_100621_length_245_cov_2.638614_g100016_i0 PRJNA797655 100621 245 2.638614 6.4646043 Bos taurus 9913 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|115494989|ref|NM_001075775.1| 9913 g100016 i0 100 16.6367346938775 245 0 100 0 1 245 954 1198 Bos taurus interleukin 36 receptor antagonist (IL36RN), mRNA blastn 4076 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781571 781571 PRJNA797655_S_NODE_100761_length_245_cov_2.351485_g100156_i0 PRJNA797655 100761 245 2.351485 5.76113825 Mus musculus 10090 Chordata Chordata 448 2.41e-121   NTclustered gi|72097143|gb|AC159976.4| 10090 g100156 i0 99.592 10.0081632653061 245 1 100 0 1 245 114336 114092 Mus musculus chromosome 3, clone RP24-224M8, complete sequence blastn 2452 448 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781572 781572 PRJNA797655_S_NODE_100781_length_245_cov_2.282178_g100176_i0 PRJNA797655 100781 245 2.282178 5.5913361 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|42415090|emb|AL805896.12| 10090 g100176 i0 100 1 245 0 100 0 1 245 28264 28020 Mouse DNA sequence from clone RP23-402I8 on chromosome 4, complete sequence blastn 245 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781573 781573 PRJNA797655_S_NODE_100801_length_245_cov_2.163366_g100196_i0 PRJNA797655 100801 245 2.163366 5.3002467 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|46240953|gb|AC133946.3| 10090 g100196 i0 100 1 245 0 100 0 1 245 77550 77306 Mus musculus BAC clone RP24-188D7 from chromosome 17, complete sequence blastn 245 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781574 781574 PRJNA797655_S_NODE_100881_length_245_cov_1.975248_g100276_i0 PRJNA797655 100881 245 1.975248 4.8393576 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|74193137|dbj|AK041434.1| 10090 g100276 i0 100 2.93061224489796 245 0 100 0 1 245 2320 2076 Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630008N14 product:unclassifiable, full insert sequence blastn 718 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781575 781575 PRJNA797655_S_NODE_100941_length_245_cov_1.900990_g100336_i0 PRJNA797655 100941 245 1.90099 4.6574255 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|76362960|gb|AC157923.4| 10090 g100336 i0 100 3 245 0 100 0 1 245 184996 185240 Mus musculus chromosome 1, clone RP23-178F20, complete sequence blastn 735 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781576 781576 PRJNA797655_S_NODE_101001_length_245_cov_1.688119_g100396_i0 PRJNA797655 101001 245 1.688119 4.13589155 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|354785188|gb|JN949689.1| 10090 g100396 i0 100 4.71836734693878 245 0 100 0 1 245 28090 28334 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Slc25a23:tm1a(KOMP)Wtsi; transgenic blastn 1156 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781577 781577 PRJNA797655_S_NODE_10101_length_508_cov_1.858065_g9528_i0 PRJNA797655 10101 508 1.858065 9.4389702 Mus musculus 10090 Chordata Chordata 939 0   NTclustered gi|78190104|gb|AC163036.2| 10090 g9528 i0 100 3 508 0 100 0 1 508 96425 95918 Mus musculus BAC clone RP23-219G12 from chromosome 17, complete sequence blastn 1524 939 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781578 781578 PRJNA797655_S_NODE_101041_length_245_cov_1.663366_g100436_i0 PRJNA797655 101041 245 1.663366 4.0752467 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|31581824|gb|AC126556.4| 10090 g100436 i0 100 3 245 0 100 0 1 245 30385 30629 Mus musculus BAC clone RP23-64L3 from chromosome 15, complete sequence blastn 735 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781579 781579 PRJNA797655_S_NODE_101061_length_245_cov_1.643564_g100456_i0 PRJNA797655 101061 245 1.643564 4.0267318 Orcinus orca 9733 Chordata Chordata 121 5.98e-23   NTclustered gi|2280722790|ref|XR_007478965.1| 9733 g100456 i0 84.677 39.5469387755102 124 16 49 2 75 195 1415 1538 PREDICTED: Orcinus orca uncharacterized LOC125965269 (LOC125965269), ncRNA blastn 9689 121 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
781580 781580 PRJNA797655_S_NODE_101081_length_245_cov_1.579208_g100476_i0 PRJNA797655 101081 245 1.579208 3.8690596 Mus musculus 10090 Chordata Chordata 379 8.929999999999999e-101   NTclustered gi|71533202|gb|AC158621.9| 10090 g100476 i0 100 2.60816326530612 205 0 100 0 41 245 12269 12473 Mus musculus 10 BAC RP23-294J10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence blastn 639 379 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781581 781581 PRJNA797655_S_NODE_101101_length_245_cov_1.470297_g100496_i0 PRJNA797655 101101 245 1.470297 3.60222765 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|50233936|gb|AC124027.2| 10090 g100496 i0 100 6.91836734693878 245 0 100 0 1 245 103675 103431 Mus musculus chromosome X clone RP21-282L18 map qA7.2, complete sequence blastn 1695 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781582 781582 PRJNA797655_S_NODE_101121_length_245_cov_1.425743_g100516_i0 PRJNA797655 101121 245 1.425743 3.49307035 Ovis aries 9940 Chordata Chordata 372 1.49e-98   NTclustered gi|2607271638|ref|XR_009601566.1| 9940 g100516 i0 96.847 3.3265306122449 222 7 91 0 24 245 17999 18220 PREDICTED: Ovis aries uncharacterized LOC121820220 (LOC121820220), transcript variant X6, ncRNA blastn 815 372 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
781583 781583 PRJNA797655_S_NODE_101141_length_245_cov_1.425743_g100536_i0 PRJNA797655 101141 245 1.425743 3.49307035 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|77020717|gb|AC154385.2| 10090 g100536 i0 100 34.9877551020408 245 0 100 0 1 245 108090 107846 Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence blastn 8572 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781584 781584 PRJNA797655_S_NODE_101161_length_245_cov_1.425743_g100556_i0 PRJNA797655 101161 245 1.425743 3.49307035 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|354790711|gb|JN955212.1| 10090 g100556 i0 100 3.62448979591837 245 0 100 0 1 245 31984 32228 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Itgav:tm1a(EUCOMM)Wtsi tm1a(EUCOMM)Hmgu; transgenic blastn 888 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781585 781585 PRJNA797655_S_NODE_101181_length_245_cov_1.386139_g100576_i0 PRJNA797655 101181 245 1.386139 3.39604055 Mus musculus 10090 Chordata Chordata 307 4.2700000000000006e-79   NTclustered gi|49217583|gb|AC099741.4| 10090 g100576 i0 100 6.48571428571429 166 0 100 0 80 245 236719 236884 Mus musculus strain C57BL6/J chromosome 6 clone RP23-92M3, complete sequence blastn 1589 307 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781586 781586 PRJNA797655_S_NODE_101201_length_245_cov_1.287129_g100596_i0 PRJNA797655 101201 245 1.287129 3.15346605 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|354785018|gb|JN949519.1| 10090 g100596 i0 100 6 245 0 100 0 1 245 14463 14219 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Icos:tm1a(EUCOMM)Wtsi; transgenic blastn 1470 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781587 781587 PRJNA797655_S_NODE_101261_length_245_cov_1.163366_g100656_i0 PRJNA797655 101261 245 1.163366 2.8502467 Mus musculus 10090 Chordata Chordata 453 5.1900000000000006e-123   NTclustered gi|56236219|gb|AC105173.10| 10090 g100656 i0 100 1 245 0 100 0 1 245 180315 180071 Mus musculus chromosome 8, clone RP23-319J15, complete sequence blastn 245 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781588 781588 PRJNA797655_S_NODE_101281_length_245_cov_0.950495_g100676_i0 PRJNA797655 101281 245 0.950495 2.32871275 Ovis aries 9940 Chordata Chordata 73.1 1.7e-8   NTclustered gi|2607078633|ref|XM_012102766.5| 9940 g100676 i0 100 20.0285714285714 39 0 16 0 3 41 6446 6408 PREDICTED: Ovis aries cutC copper transporter (CUTC), transcript variant X3, mRNA blastn 4907 73.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
781589 781589 PRJNA797655_S_NODE_101341_length_244_cov_7.368159_g100736_i0 PRJNA797655 101341 244 7.368159 17.97830796 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|82491764|gb|AC163442.16| 10090 g100736 i0 100 1 244 0 100 0 1 244 176492 176735 Mus musculus chromosome 8, clone RP23-441L19, complete sequence blastn 244 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781590 781590 PRJNA797655_S_NODE_101361_length_244_cov_5.626866_g100756_i0 PRJNA797655 101361 244 5.626866 13.72955304 Bos taurus 9913 Chordata Chordata 351 1.9399999999999998e-92   NTclustered gi|1068294018|gb|KX592814.1| 9913 g100756 i0 98.985 5.75819672131148 197 0 81 2 1 197 7558755 7558561 Bos taurus isolate Dominette_000065F genomic sequence blastn 1405 351 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781591 781591 PRJNA797655_S_NODE_10141_length_507_cov_5.771552_g9568_i0 PRJNA797655 10141 507 5.771552 29.26176864 Mus musculus 10090 Chordata Chordata 905 0   NTclustered gi|117168360|gb|AC156026.3| 10090 g9568 i0 100 27.6923076923077 490 0 97 0 1 490 120270 120759 Mus musculus BAC clone RP23-74O4 from chromosome 16, complete sequence blastn 14040 905 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781592 781592 PRJNA797655_S_NODE_101421_length_244_cov_4.084577_g100816_i0 PRJNA797655 101421 244 4.084577 9.96636788 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|23893082|emb|AL806533.8| 10090 g100816 i0 100 1.12295081967213 244 0 100 0 1 244 186329 186086 Mouse DNA sequence from clone RP23-468I23 on chromosome 4, complete sequence blastn 274 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781593 781593 PRJNA797655_S_NODE_101441_length_244_cov_3.850746_g100836_i0 PRJNA797655 101441 244 3.850746 9.39582024 Mus musculus 10090 Chordata Chordata 418 1.8799999999999994e-112   NTclustered gi|61889033|gb|AC101911.9| 10090 g100836 i0 97.541 33.1065573770492 244 6 100 0 1 244 71337 71094 Mus musculus chromosome 19, clone RP24-374E20, complete sequence blastn 8078 418 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781594 781594 PRJNA797655_S_NODE_101461_length_244_cov_3.656716_g100856_i0 PRJNA797655 101461 244 3.656716 8.92238704 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|21955525|emb|AL669982.10| 10090 g100856 i0 100 16.2295081967213 244 0 100 0 1 244 167845 168088 Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete sequence blastn 3960 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781595 781595 PRJNA797655_S_NODE_101521_length_244_cov_3.238806_g100916_i0 PRJNA797655 101521 244 3.238806 7.90268664 Mus musculus 10090 Chordata Chordata 438 1.45e-118   NTclustered gi|21998175|emb|AL603804.18| 10090 g100916 i0 99.177 5.09426229508197 243 2 99 0 2 244 181925 181683 Mouse DNA sequence from clone RP23-470C16 on chromosome 19, complete sequence blastn 1243 438 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781596 781596 PRJNA797655_S_NODE_101581_length_244_cov_2.950249_g100976_i0 PRJNA797655 101581 244 2.950249 7.19860756 Bos taurus 9913 Chordata Chordata 451 1.86e-122   NTclustered gi|2587625062|ref|XR_003036937.2| 9913 g100976 i0 100 2 244 0 100 0 1 244 69 312 PREDICTED: Bos taurus uncharacterized lncRNA (LOC112448538), ncRNA blastn 488 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781597 781597 PRJNA797655_S_NODE_101601_length_244_cov_2.865672_g100996_i0 PRJNA797655 101601 244 2.865672 6.99223968 Bos javanicus 9906 Chordata Chordata 278 3.34e-70   NTclustered gi|2633838221|ref|XM_061408194.1| 9906 g100996 i0 88.362 41.8811475409836 232 26 95 1 13 244 11373 11143 PREDICTED: Bos javanicus Fc gamma receptor Ia (FCGR1A), mRNA blastn 10219 278 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
781598 781598 PRJNA797655_S_NODE_10161_length_507_cov_3.689655_g9588_i0 PRJNA797655 10161 507 3.689655 18.70655085 Mus musculus 10090 Chordata Chordata 937 0   NTclustered gi|17736577|emb|AL603662.11| 10090 g9588 i0 100 1 507 0 100 0 1 507 26100 26606 Mouse DNA sequence from clone RP23-396M19 on chromosome 11, complete sequence blastn 507 937 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781599 781599 PRJNA797655_S_NODE_101641_length_244_cov_2.731343_g101036_i0 PRJNA797655 101641 244 2.731343 6.66447692 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|49218198|gb|AC107742.10| 10090 g101036 i0 100 1 244 0 100 0 1 244 153204 153447 Mus musculus chromosome 15, clone RP23-331D7, complete sequence blastn 244 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781600 781600 PRJNA797655_S_NODE_101681_length_244_cov_2.621891_g101076_i0 PRJNA797655 101681 244 2.621891 6.39741404 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|71533513|gb|AC159210.2| 10090 g101076 i0 100 1 244 0 100 0 1 244 154799 154556 Mus musculus BAC clone RP23-54F9 from chromosome 13, complete sequence blastn 244 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781601 781601 PRJNA797655_S_NODE_101701_length_244_cov_2.532338_g101096_i0 PRJNA797655 101701 244 2.532338 6.17890472 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|17736590|emb|AL606918.9| 10090 g101096 i0 100 39.1393442622951 244 0 100 0 1 244 33032 33275 Mouse DNA sequence from clone RP23-327O13 on chromosome 4, complete sequence blastn 9550 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781602 781602 PRJNA797655_S_NODE_101721_length_244_cov_2.412935_g101116_i0 PRJNA797655 101721 244 2.412935 5.8875614 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|354799783|gb|JN964284.1| 10090 g101116 i0 100 3 244 0 100 0 1 244 14943 14700 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Eif5a:tm1a(EUCOMM)Wtsi; transgenic blastn 732 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781603 781603 PRJNA797655_S_NODE_101781_length_244_cov_2.333333_g101176_i0 PRJNA797655 101781 244 2.333333 5.69333252 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|38198760|gb|AC135638.5| 10090 g101176 i0 100 3.02868852459016 244 0 100 0 1 244 80120 79877 Mus musculus BAC clone RP23-330K10 from chromosome 18, complete sequence blastn 739 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781604 781604 PRJNA797655_S_NODE_101801_length_244_cov_2.253731_g101196_i0 PRJNA797655 101801 244 2.253731 5.49910364 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|77539190|emb|CT009550.5| 10090 g101196 i0 100 3 244 0 100 0 1 244 155776 156019 Mouse DNA sequence from clone RP23-38F20 on chromosome 14, complete sequence blastn 732 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781605 781605 PRJNA797655_S_NODE_10181_length_507_cov_1.965517_g9608_i0 PRJNA797655 10181 507 1.965517 9.96517119 Mus musculus 10090 Chordata Chordata 865 0   NTclustered gi|71067257|gb|AC156982.8| 10090 g9608 i0 99.788 7.72189349112426 472 0 100 1 1 471 44508 44979 Mus musculus chromosome 19, clone RP23-183N3, complete sequence blastn 3915 865 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781606 781606 PRJNA797655_S_NODE_101841_length_244_cov_2.149254_g101236_i0 PRJNA797655 101841 244 2.149254 5.24417976 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|354787904|gb|JN952405.1| 10090 g101236 i0 100 6 244 0 100 0 1 244 8166 7923 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Gm5069:tm1e(KOMP)Wtsi; transgenic blastn 1464 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781607 781607 PRJNA797655_S_NODE_101901_length_244_cov_2.044776_g101296_i0 PRJNA797655 101901 244 2.044776 4.98925344 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|29825883|gb|AC131675.4| 10090 g101296 i0 100 28.1352459016393 244 0 100 0 1 244 1131 1374 Mus musculus BAC clone RP23-328L1 from chromosome 18, complete sequence blastn 6865 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781608 781608 PRJNA797655_S_NODE_101981_length_244_cov_1.910448_g101376_i0 PRJNA797655 101981 244 1.910448 4.66149312 Mus musculus 10090 Chordata Chordata 440 4.019999999999999e-119   NTclustered gi|2252917347|ref|NM_001408265.1| 10090 g101376 i0 100 74.6352459016394 238 0 98 0 7 244 1274 1037 Mus musculus sterile alpha motif domain containing 3 (Samd3), transcript variant 3, mRNA blastn 18211 440 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781609 781609 PRJNA797655_S_NODE_102021_length_244_cov_1.810945_g101416_i0 PRJNA797655 102021 244 1.810945 4.4187058 Mus musculus 10090 Chordata Chordata 403 5.27e-108   NTclustered gi|38502453|gb|AC114542.9| 10090 g101416 i0 100 5.51229508196721 218 0 89 0 1 218 222184 222401 Mus musculus chromosome 9, clone RP23-111F9, complete sequence blastn 1345 403 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781610 781610 PRJNA797655_S_NODE_102061_length_244_cov_1.671642_g101456_i0 PRJNA797655 102061 244 1.671642 4.07880648 Mus musculus 10090 Chordata Chordata 414 2.44e-111   NTclustered gi|77404072|gb|AC161809.3| 10090 g101456 i0 100 1.83606557377049 224 0 92 0 21 244 178428 178205 Mus musculus chromosome 1, clone RP23-114N13, complete sequence blastn 448 414 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781611 781611 PRJNA797655_S_NODE_102101_length_244_cov_1.671642_g101496_i0 PRJNA797655 102101 244 1.671642 4.07880648 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|24137598|gb|AC121910.3| 10090 g101496 i0 100 1 244 0 100 0 1 244 86275 86032 Mus musculus BAC clone RP24-180H14 from chromosome 13, complete sequence blastn 244 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781612 781612 PRJNA797655_S_NODE_102121_length_244_cov_1.626866_g101516_i0 PRJNA797655 102121 244 1.626866 3.96955304 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|354789613|gb|JN954114.1| 10090 g101516 i0 100 39.8811475409836 244 0 100 0 1 244 11133 11376 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Gle1:tm1a(EUCOMM)Wtsi; transgenic blastn 9731 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781613 781613 PRJNA797655_S_NODE_102141_length_244_cov_1.547264_g101536_i0 PRJNA797655 102141 244 1.547264 3.77532416 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|354798518|gb|JN963019.1| 10090 g101536 i0 100 3 244 0 100 0 1 244 14832 14589 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Atp5a1:tm1a(EUCOMM)Wtsi; transgenic blastn 732 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781614 781614 PRJNA797655_S_NODE_102161_length_244_cov_1.432836_g101556_i0 PRJNA797655 102161 244 1.432836 3.49611984 Bos taurus 9913 Chordata Chordata 451 1.86e-122   NTclustered gi|2587672210|ref|XR_816146.4| 9913 g101556 i0 100 3.00409836065574 244 0 100 0 1 244 2857 2614 PREDICTED: Bos taurus uncharacterized lncRNA (LOC104976162), ncRNA blastn 733 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781615 781615 PRJNA797655_S_NODE_1021_length_1025_cov_32.677189_g796_i0 PRJNA797655 1021 1025 32.677189 334.94118725 Mus musculus 10090 Chordata Chordata 1893 0   NTclustered gi|2207981724|ref|NM_152839.4| 10090 g796 i0 100 55.6419512195122 1025 0 100 0 1 1025 278 1302 Mus musculus immunoglobulin joining chain (Jchain), mRNA blastn 57033 1893 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781616 781616 PRJNA797655_S_NODE_102201_length_244_cov_1.432836_g101596_i0 PRJNA797655 102201 244 1.432836 3.49611984 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|270483844|ref|NM_172882.3| 10090 g101596 i0 100 47.9754098360656 244 0 100 0 1 244 11046 11289 Mus musculus WD repeat and FYVE domain containing 3 (Wdfy3), mRNA blastn 11706 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781617 781617 PRJNA797655_S_NODE_10221_length_506_cov_5.280778_g9648_i0 PRJNA797655 10221 506 5.280778 26.72073668 Mus musculus 10090 Chordata Chordata 935 0   NTclustered gi|73808260|gb|AC166831.3| 10090 g9648 i0 100 2.15415019762846 506 0 100 0 1 506 24198 24703 Mus musculus BAC clone RP23-270P14 from chromosome 16, complete sequence blastn 1090 935 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781618 781618 PRJNA797655_S_NODE_102221_length_244_cov_1.398010_g101616_i0 PRJNA797655 102221 244 1.39801 3.4111444 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|1907159427|ref|XM_006534687.4| 10090 g101616 i0 100 28.0450819672131 244 0 100 0 1 244 4167 4410 PREDICTED: Mus musculus guanylate binding protein 6 (Gbp6), transcript variant X2, mRNA blastn 6843 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781619 781619 PRJNA797655_S_NODE_102241_length_244_cov_1.273632_g101636_i0 PRJNA797655 102241 244 1.273632 3.10766208 Mus musculus 10090 Chordata Chordata 446 8.639999999999999e-121   NTclustered gi|59958549|gb|AC154412.3| 10090 g101636 i0 99.59 3.04098360655738 244 1 100 0 1 244 151577 151820 Mus musculus BAC clone RP24-225G4 from 14, complete sequence blastn 742 446 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781620 781620 PRJNA797655_S_NODE_102261_length_244_cov_1.194030_g101656_i0 PRJNA797655 102261 244 1.19403 2.9134332 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|74218175|gb|AC165155.2| 10090 g101656 i0 100 102.508196721311 244 0 100 0 1 244 123923 123680 Mus musculus BAC clone RP23-293N22 from chromosome 14, complete sequence blastn 25012 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781621 781621 PRJNA797655_S_NODE_102281_length_244_cov_1.154229_g101676_i0 PRJNA797655 102281 244 1.154229 2.81631876 Mus musculus 10090 Chordata Chordata 446 8.639999999999999e-121   NTclustered gi|26348784|dbj|AK080817.1| 10090 g101676 i0 99.59 8.33196721311475 244 1 100 0 1 244 768 525 Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230312E02 product:hypothetical protein, full insert sequence blastn 2033 446 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781622 781622 PRJNA797655_S_NODE_102301_length_244_cov_0.955224_g101696_i0 PRJNA797655 102301 244 0.955224 2.33074656 Mus musculus 10090 Chordata Chordata 451 1.86e-122   NTclustered gi|30851592|gb|BC052452.1| 10090 g101696 i0 100 12.6844262295082 244 0 100 0 1 244 215 458 Mus musculus minichromosome maintenance deficient 3 (S. cerevisiae) associated protein, mRNA (cDNA clone MGC:63437 IMAGE:6409827), complete cds blastn 3095 451 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781623 781623 PRJNA797655_S_NODE_102341_length_243_cov_18.560000_g101736_i0 PRJNA797655 102341 243 18.56 45.1008 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|77917470|emb|CT009728.8| 10090 g101736 i0 100 104.901234567901 243 0 100 0 1 243 27689 27447 Mouse DNA sequence from clone RP23-57I20 on chromosome 13, complete sequence blastn 25491 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781624 781624 PRJNA797655_S_NODE_102381_length_243_cov_5.325000_g101776_i0 PRJNA797655 102381 243 5.325 12.93975 Ovis aries 9940 Chordata Chordata 387 5.29e-103   NTclustered gi|2606967592|ref|XM_012174728.5| 9940 g101776 i0 95.473 4.03292181069959 243 10 100 1 1 243 5126 4885 PREDICTED: Ovis aries protein kinase cAMP-activated catalytic subunit beta (PRKACB), transcript variant X3, mRNA blastn 980 387 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
781625 781625 PRJNA797655_S_NODE_102421_length_243_cov_4.385000_g101816_i0 PRJNA797655 102421 243 4.385 10.65555 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|307078189|gb|AC241616.3| 10090 g101816 i0 100 2.20987654320988 243 0 100 0 1 243 63206 63448 Mus musculus BAC clone CH25-309J2 from chromosome 9, complete sequence blastn 537 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781626 781626 PRJNA797655_S_NODE_102441_length_243_cov_4.075000_g101836_i0 PRJNA797655 102441 243 4.075 9.90225 Bos taurus 9913 Chordata Chordata 119 2.13e-22   NTclustered gi|2587621367|ref|XM_024996826.2| 9913 g101836 i0 98.507 33.4444444444444 67 1 28 0 177 243 249 183 PREDICTED: Bos taurus keratin-associated protein 12-1-like (LOC112448007), mRNA blastn 8127 119 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781627 781627 PRJNA797655_S_NODE_102541_length_243_cov_3.195000_g101936_i0 PRJNA797655 102541 243 3.195 7.76385 Bos taurus 9913 Chordata Chordata 449 6.65e-122   NTclustered gi|34849947|gb|AC092858.21| 9913 g101936 i0 100 34.3086419753086 243 0 100 0 1 243 116897 117139 Bos taurus clone rp42-147e22, complete sequence blastn 8337 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781628 781628 PRJNA797655_S_NODE_102581_length_243_cov_2.995000_g101976_i0 PRJNA797655 102581 243 2.995 7.27785 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|354782541|gb|JN947042.1| 10090 g101976 i0 100 3 243 0 100 0 1 243 37181 36939 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Fam59b:tm1a(KOMP)Ucd; transgenic blastn 729 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781629 781629 PRJNA797655_S_NODE_10261_length_505_cov_25.610390_g9688_i0 PRJNA797655 10261 505 25.61039 129.3324695 Mus musculus 10090 Chordata Chordata 933 0   NTclustered gi|86989525|emb|CT033751.4| 10090 g9688 i0 100 15.7148514851485 505 0 100 0 1 505 63609 64113 Mouse DNA sequence from clone RP24-236O3 on chromosome 17, complete sequence blastn 7936 933 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781630 781630 PRJNA797655_S_NODE_102701_length_243_cov_2.640000_g102096_i0 PRJNA797655 102701 243 2.64 6.4152 Equus caballus 9796 Chordata Chordata 111 3.56e-20   NTclustered gi|32264540|gb|AY246818.1| 9796 g102096 i0 78.736 50.6008230452675 174 32 70 4 41 211 242 71 Equus caballus subtracted library fragment 54 blastn 12296 111 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Perissodactyla Equidae Equus Equus caballus
781631 781631 PRJNA797655_S_NODE_102721_length_243_cov_2.635000_g102116_i0 PRJNA797655 102721 243 2.635 6.40305 Muntiacus reevesi 9886 Chordata Chordata 267 7.19e-67   NTclustered gi|2746013708|ref|XR_010659521.1| 9886 g102116 i0 92.105 1.30041152263374 190 13 78 2 54 242 163 351 PREDICTED: Muntiacus reevesi uncharacterized lncRNA (LOC136148587), ncRNA blastn 316 267 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Muntiacus Muntiacus reevesi
781632 781632 PRJNA797655_S_NODE_102741_length_243_cov_2.580000_g102136_i0 PRJNA797655 102741 243 2.58 6.2694 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|89257707|gb|AC114648.25| 10090 g102136 i0 100 3 243 0 100 0 1 243 18266 18024 Mus musculus chromosome 8, clone RP24-144H17, complete sequence blastn 729 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781633 781633 PRJNA797655_S_NODE_102761_length_243_cov_2.500000_g102156_i0 PRJNA797655 102761 243 2.5 6.075 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|51889860|gb|AC117723.8| 10090 g102156 i0 100 2 243 0 100 0 1 243 6929 7171 Mus musculus chromosome 1, clone RP24-232C21, complete sequence blastn 486 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781634 781634 PRJNA797655_S_NODE_102781_length_243_cov_2.410000_g102176_i0 PRJNA797655 102781 243 2.41 5.8563 Bos javanicus 9906 Chordata Chordata 239 1.57e-58   NTclustered gi|2633816477|ref|XR_009733675.1| 9906 g102176 i0 97.163 1.0082304526749 141 4 100 0 1 141 38374 38514 PREDICTED: Bos javanicus uncharacterized LOC133238917 (LOC133238917), ncRNA blastn 245 239 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
781635 781635 PRJNA797655_S_NODE_102801_length_243_cov_2.400000_g102196_i0 PRJNA797655 102801 243 2.4 5.832 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|354787840|gb|JN952341.1| 10090 g102196 i0 100 3 243 0 100 0 1 243 4392 4634 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Ctnnb1:tm1e(EUCOMM)Hmgu; transgenic blastn 729 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781636 781636 PRJNA797655_S_NODE_10281_length_505_cov_7.004329_g9707_i0 PRJNA797655 10281 505 7.004329 35.37186145 Mus musculus 10090 Chordata Chordata 891 0   NTclustered gi|45332638|gb|AC140209.2| 10090 g9707 i0 99.794 1.92475247524752 486 0 96 1 20 505 54695 55179 Mus musculus BAC clone RP24-472D23 from chromosome 15, complete sequence blastn 972 891 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781637 781637 PRJNA797655_S_NODE_102821_length_243_cov_2.385000_g102216_i0 PRJNA797655 102821 243 2.385 5.79555 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|55251541|gb|AC150275.2| 10090 g102216 i0 100 82.5020576131687 243 0 100 0 1 243 96010 96252 Mus musculus BAC clone RP23-409M16 from 7, complete sequence blastn 20048 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781638 781638 PRJNA797655_S_NODE_102861_length_243_cov_2.210000_g102256_i0 PRJNA797655 102861 243 2.21 5.3703 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|60650507|gb|AC114424.10| 10090 g102256 i0 100 3 243 0 100 0 1 243 78498 78256 Mus musculus chromosome 3, clone RP24-84L9, complete sequence blastn 729 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781640 781640 PRJNA797655_S_NODE_102921_length_243_cov_2.145000_g102316_i0 PRJNA797655 102921 243 2.145 5.21235 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|121951818|gb|AC107638.18| 10090 g102316 i0 100 1 243 0 100 0 1 243 105540 105298 Mus musculus chromosome 7, clone RP23-44D14, complete sequence blastn 243 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781641 781641 PRJNA797655_S_NODE_102961_length_243_cov_2.020000_g102356_i0 PRJNA797655 102961 243 2.02 4.9086 Mus musculus 10090 Chordata Chordata 431 2.4099999999999995e-116   NTclustered gi|1039748536|ref|XM_017316524.1| 10090 g102356 i0 98.765 6.39506172839506 243 1 99 2 1 242 168 409 PREDICTED: Mus musculus La ribonucleoprotein 4 (Larp4), transcript variant X1, mRNA blastn 1554 431 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781642 781642 PRJNA797655_S_NODE_102981_length_243_cov_1.920000_g102376_i0 PRJNA797655 102981 243 1.92 4.6656 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|1720428536|ref|XM_030243809.1| 10090 g102376 i0 100 41.0205761316872 243 0 100 0 1 243 5204 5446 PREDICTED: Mus musculus CYLD lysine 63 deubiquitinase (Cyld), transcript variant X10, mRNA blastn 9968 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781643 781643 PRJNA797655_S_NODE_10301_length_505_cov_3.826840_g9727_i0 PRJNA797655 10301 505 3.82684 19.325542 Bos taurus 9913 Chordata Chordata 459 2.49e-124   NTclustered gi|2587672353|ref|XM_059882672.1| 9913 g9727 i0 98.833 12.980198019802 257 3 51 0 249 505 11794 12050 PREDICTED: Bos taurus ubiquitin specific peptidase 54 (USP54), transcript variant X6, mRNA blastn 6555 459 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
781644 781644 PRJNA797655_S_NODE_103041_length_243_cov_1.920000_g102436_i0 PRJNA797655 103041 243 1.92 4.6656 Bubalus kerabau 3119969 Chordata Chordata 388 1.47e-103   NTclustered gi|2496503050|ref|XR_008716714.1| 3119969 g102436 i0 95.833 2.41152263374486 240 10 99 0 1 240 1663 1902 PREDICTED: Bubalus kerabau uncharacterized LOC129657428 (LOC129657428), ncRNA blastn 586 388 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
781645 781645 PRJNA797655_S_NODE_103061_length_243_cov_1.860000_g102456_i0 PRJNA797655 103061 243 1.86 4.5198 Mus musculus 10090 Chordata Chordata 444 3.09e-120   NTclustered gi|26084852|dbj|AK035822.1| 10090 g102456 i0 99.588 2 243 1 100 0 1 243 106 348 Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630008E13 product:unclassifiable, full insert sequence blastn 486 444 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781646 781646 PRJNA797655_S_NODE_103101_length_243_cov_1.695000_g102496_i0 PRJNA797655 103101 243 1.695 4.11885 Bos indicus 9915 Chordata Chordata 121 5.92e-23   NTclustered gi|2878414704|ref|XM_070769781.1| 9915 g102496 i0 91.011 35.7942386831276 89 8 37 0 149 237 11758 11670 PREDICTED: Bos indicus zinc and ring finger 3 (ZNRF3), transcript variant X2, mRNA blastn 8698 121 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos indicus
781647 781647 PRJNA797655_S_NODE_103161_length_243_cov_1.670000_g102556_i0 PRJNA797655 103161 243 1.67 4.0581 Mus musculus 10090 Chordata Chordata 409 1.1299999999999998e-109   NTclustered gi|40949631|gb|AC131679.2| 10090 g102556 i0 99.123 0.938271604938272 228 1 94 1 1 228 31079 31305 Mus musculus BAC clone RP23-339I6 from chromosome 5, complete sequence blastn 228 409 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781648 781648 PRJNA797655_S_NODE_103201_length_243_cov_1.530000_g102596_i0 PRJNA797655 103201 243 1.53 3.7179 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|354792185|gb|JN956686.1| 10090 g102596 i0 100 3 243 0 100 0 1 243 25820 25578 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Rcc2:tm1e(EUCOMM)Wtsi; transgenic blastn 729 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781649 781649 PRJNA797655_S_NODE_103221_length_243_cov_1.440000_g102616_i0 PRJNA797655 103221 243 1.44 3.4992 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|56122109|gb|AC116671.14| 10090 g102616 i0 100 2 243 0 100 0 1 243 34301 34059 Mus musculus chromosome 3, clone RP23-111L16, complete sequence blastn 486 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
781650 781650 PRJNA797655_S_NODE_103261_length_243_cov_1.440000_g102656_i0 PRJNA797655 103261 243 1.44 3.4992 Mus musculus 10090 Chordata Chordata 449 6.65e-122   NTclustered gi|31746698|gb|AC124357.3| 10090 g102656 i0 100 2 243 0 100 0 1 243 29018 28776 Mus musculus BAC clone RP24-490K11 from chromosome 19, complete sequence blastn 486 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;