RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA797655", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Melainabacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA797655 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9710231 9710231 PRJNA797655_S_NODE_112068_length_235_cov_1.250000_g111463_i0 PRJNA797655 112068 235 1.25 2.9375 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 52.8 0.021   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g111463 i0 100 0.119148936170213 28 0 12 0 78 105 354451 354478 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
12268403 12268403 PRJNA797655_S_NODE_84490_length_262_cov_3.301370_g83885_i0 PRJNA797655 84490 262 3.30137 8.6495894 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 446 9.379999999999998e-121   NTclustered gi|2729058729|emb|OZ007029.1| 2137880 g83885 i0 97.328 1 262 7 100 0 1 262 16586 16325 MAG: Candidatus Gastranaerophilales bacterium isolate 6755_HET_CTRL_tig00013926_hicanu_large MAG genome assembly, chromosome: 1 blastn 262 446 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium
14816644 14816644 PRJNA797655_S_NODE_59692_length_297_cov_1.456693_g59087_i0 PRJNA797655 59692 297 1.456693 4.32637821 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 52.8 0.028   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g59087 i0 88.889 0.151515151515152 45 2 14 2 47 88 1079068 1079112 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 45 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
28412031 28412031 PRJNA797655_S_NODE_268706_length_152_cov_1.761468_g268101_i0 PRJNA797655 268706 152 1.761468 2.67743136 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 103 3.79e-24   NR MBQ2984034.1 2137880 g268101 i0 98 1.97368421052632 50 1 98.7 0 150 1 363 412 MBQ2984034.1 glycogen synthase [Candidatus Gastranaerophilales bacterium] diamond 300 103 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;