RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA797655", tax_clade = "ant, tsetse, mealybug, aphid, etc. endosymbionts" and tax_phylum = "Pseudomonadota"

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tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • ant, tsetse, mealybug, aphid, etc. endosymbionts · 2 ✖

bioproject 1

  • PRJNA797655 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10988694 10988694 PRJNA797655_S_NODE_20069_length_413_cov_2.464865_g19472_i0 PRJNA797655 20069 413 2.464865 10.17989245 Candidatus Stammera capleta 2608262 Bacteria Bacteria 52.8 0.04   NTclustered gi|2676815352|gb|CP144834.1| 2608262 g19472 i0 100 0.0677966101694915 28 0 7 0 280 307 239091 239064 MAG: Candidatus Stammera capleta isolate EEOBICKM chromosome blastn 28 52.8 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
19068916 19068916 PRJNA797655_S_NODE_173935_length_192_cov_1.288591_g173330_i0 PRJNA797655 173935 192 1.288591 2.47409472 Candidatus Blochmanniella 203804 Bacteria Bacteria 58.4 3.55e-4   NTclustered gi|2246420380|gb|CP097750.1| 108080 g173330 i0 97.059 0.885416666666667 34 1 18 0 155 188 633784 633751 Candidatus Blochmanniella camponoti strain C-050 chromosome, complete genome blastn 170 58.4 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Blochmanniella Candidatus Blochmanniella camponoti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;