RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA797655", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 3 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 3 ✖

bioproject 1

  • PRJNA797655 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29327495 29327495 PRJNA797655_S_NODE_76449_length_272_cov_2.851528_g75844_i0 PRJNA797655 76449 272 2.851528 7.75615616 Lentisphaeria bacterium 2053569 Bacteria Bacteria 43.9 0.0204   NR MBO5990022.1 2053569 g75844 i0 43.2 0.485294117647059 44 25 48.5 0 268 137 18 61 MBO5990022.1 TolC family protein [Lentisphaeria bacterium] diamond 132 43.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
29548401 29548401 PRJNA797655_S_NODE_104730_length_241_cov_3.040404_g104125_i0 PRJNA797655 104730 241 3.040404 7.32737364 Lentisphaerota bacterium 1932692 Bacteria Bacteria 43.1 0.0257   NR NLX25613.1 1932692 g104125 i0 32.7 0.609958506224066 49 31 61 1 84 230 118 164 NLX25613.1 hypothetical protein [Lentisphaerota bacterium] diamond 147 43.1 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium
32583414 32583414 PRJNA797655_S_NODE_204999_length_176_cov_2.526316_g204394_i0 PRJNA797655 204999 176 2.526316 4.44631616 Lentisphaerota bacterium 1932692 Bacteria Bacteria 85.9 6.8e-20   NR MBE6365228.1 1932692 g204394 i0 97.9 0.801136363636364 47 1 80.1 0 176 36 30 76 MBE6365228.1 hypothetical protein [Lentisphaerota bacterium] diamond 141 85.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;