RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA797655", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA797655 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28317260 28317260 PRJNA797655_S_NODE_39146_length_339_cov_3.395270_g38541_i0 PRJNA797655 39146 339 3.39527 11.5099653 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 92 4.85e-19   NR MBK7497391.1 2035772 g38541 i0 48.2 0.991150442477876 112 57 98.2 1 1 333 40 151 MBK7497391.1 DEAD/DEAH box helicase [Candidatus Omnitrophota bacterium] diamond 336 92 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32645853 32645853 PRJNA797655_S_NODE_111360_length_235_cov_2.750000_g110755_i0 PRJNA797655 111360 235 2.75 6.4625 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.5 0.0174   NR RKY37208.1 2035772 g110755 i0 34.3 0.893617021276596 70 44 86.8 1 224 21 226 295 RKY37208.1 MAG: hypothetical protein DRP78_01670 [Candidatus Omnitrophota bacterium] diamond 210 43.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;