RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA797655" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA797655 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29106666 29106666 PRJNA797655_S_NODE_169588_length_194_cov_2.086093_g168983_i0 PRJNA797655 169588 194 2.086093 4.04702042 Prymnesium parvum 97485 Haptophyta other_Eukaryota 41.6 0.049   NR KAL1521813.1 97485 g168983 i0 51.3 0.603092783505155 39 19 60.3 0 4 120 280 318 KAL1521813.1 hypothetical protein AB1Y20_021464 [Prymnesium parvum] diamond 117 41.6 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
31760602 31760602 PRJNA797655_S_NODE_110397_length_236_cov_2.331606_g109792_i0 PRJNA797655 110397 236 2.331606 5.50259016 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 40 0.0378   NR KAJ1627561.1 483367 g109792 i0 42.1 0.483050847457627 38 22 48.3 0 154 41 13 50 KAJ1627561.1 hypothetical protein T492DRAFT_1023687, partial [Pavlovales sp. CCMP2436] diamond 114 40 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;