RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where bioproject = "PRJNA797475" and tax_phylum = "Cnidaria"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 19 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA797475 · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3332517 3332517 PRJNA797475_P_NODE_26943_length_245_cov_0.895349_g26844_i0 PRJNA797475 26943 245 0.895349 2.19360505 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 122 1.66e-23   NTclustered gi|2782948454|ref|XM_067078050.1| 252671 g26844 i0 78.723 15.8530612244898 188 36 76 4 1 186 200 385 PREDICTED: Clytia hemisphaerica late histone H2A.2.2-like (LOC136821830), mRNA blastn 3884 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
5885061 5885061 PRJNA797475_P_NODE_30585_length_240_cov_2.706587_g30486_i0 PRJNA797475 30585 240 2.706587 6.4958088 Anthopleura buddemeieri 1566020 Cnidaria other_Eukaryota 337 5.32e-88   NTclustered gi|1229749024|gb|KY789381.1| 1566020 g30486 i0 92.116 98.1458333333333 241 15 100 4 1 240 583 346 Anthopleura buddemeieri isolate budd 28S ribosomal RNA gene, partial sequence blastn 23555 337 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anthopleura Anthopleura buddemeieri
8434611 8434611 PRJNA797475_P_NODE_27767_length_244_cov_0.900585_g27668_i0 PRJNA797475 27767 244 0.900585 2.1974274 Hydra vulgaris 6087 Cnidaria other_Eukaryota 195 3.46e-45   NTclustered gi|2744840031|ref|XM_065787835.1| 6087 g27668 i0 82.096 5.91803278688525 229 39 93 2 17 244 839 612 PREDICTED: Hydra vulgaris rRNA 2'-O-methyltransferase fibrillarin (LOC100212665), transcript variant X4, mRNA blastn 1444 195 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
12260955 12260955 PRJNA797475_P_NODE_26810_length_245_cov_0.895349_g26711_i0 PRJNA797475 26810 245 0.895349 2.19360505 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 337 5.45e-88   NTclustered gi|1778041774|ref|XM_031702547.1| 6105 g26711 i0 92.05 1.23673469387755 239 19 98 0 4 242 4207 4445 PREDICTED: Actinia tenebrosa collagen alpha-1(I) chain-like (LOC116294868), mRNA blastn 303 337 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
16083885 16083885 PRJNA797475_P_NODE_17813_length_269_cov_1.397959_g17714_i0 PRJNA797475 17813 269 1.397959 3.76050971 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 150 8.14e-43   NR KAK2564131.1 6130 g17714 i0 78.4 32.3866171003717 88 19 98.1 0 267 4 42 129 KAK2564131.1 60S ribosomal protein L10 [Acropora cervicornis] diamond 8712 151 0.993377483443709 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora cervicornis
17359679 17359679 PRJNA797475_P_NODE_11834_length_309_cov_1.932203_g11735_i0 PRJNA797475 11834 309 1.932203 5.97050727 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 162 7.509999999999999e-48   NR XP_065063129.1 499914 g11735 i0 70.6 2.97087378640777 102 30 99 0 307 2 126 227 XP_065063129.1 large ribosomal subunit protein uL30-like [Rhopilema esculentum] diamond 918 162 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
17359921 17359921 PRJNA797475_P_NODE_30334_length_241_cov_0.916667_g30235_i0 PRJNA797475 30334 241 0.916667 2.20916747 Anemonia sulcata 6108 Cnidaria other_Eukaryota 204 5.66e-48   NTclustered gi|2917940696|emb|OZ237557.1| 6108 g30235 i0 90.323 0.643153526970954 155 15 64 0 8 162 17552648 17552494 Anemonia sulcata genome assembly, chromosome: 3 blastn 155 204 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
26736943 26736943 PRJNA797475_P_NODE_15081_length_283_cov_1.466667_g14982_i0 PRJNA797475 15081 283 1.466667 4.15066761 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 63.2 9.25e-10   NR XP_057306384.1 13093 g14982 i0 40.8 0.752650176678445 71 42 75.3 0 217 5 17 87 XP_057306384.1 muscle-specific protein 20-like [Hydractinia symbiolongicarpus] diamond 213 63.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
26800648 26800648 PRJNA797475_P_NODE_17521_length_270_cov_2.340102_g17422_i0 PRJNA797475 17521 270 2.340102 6.3182754 Hydra vulgaris 6087 Cnidaria other_Eukaryota 68.9 1.01e-12   NR NP_001296690.1 6087 g17422 i0 72.7 0.977777777777778 44 12 48.9 0 135 4 6 49 NP_001296690.1 60S ribosomal protein L35a-like [Hydra vulgaris] diamond 264 68.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
27053984 27053984 PRJNA797475_P_NODE_19702_length_259_cov_1.655914_g19603_i0 PRJNA797475 19702 259 1.655914 4.28881726 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 119 8.859999999999999e-32   NR KAJ7384493.1 174260 g19603 i0 67.1 2.95366795366795 85 28 98.5 0 255 1 3 87 KAJ7384493.1 60S ribosomal protein L17 [Desmophyllum pertusum] diamond 765 119 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum
27211750 27211750 PRJNA797475_P_NODE_28722_length_243_cov_0.905882_g28623_i0 PRJNA797475 28722 243 0.905882 2.20129326 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 42.7 0.0346   NR XP_066911680.1 252671 g28623 i0 50 2.03703703703704 42 21 51.9 0 129 4 100 141 XP_066911680.1 squidulin-like isoform X2 [Clytia hemisphaerica] diamond 495 43.1 0.990719257540603 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
27695101 27695101 PRJNA797475_P_NODE_3524_length_525_cov_1.314159_g3426_i0 PRJNA797475 3524 525 1.314159 6.89933475 root 1 Root_unresolved Root_unresolved 116 3.5100000000000004e-27   NR XP_066918380.1 252671 g3426 i0 52.7 3.01142857142857 110 49 62.9 1 521 192 3 109 XP_066918380.1 probable phosphoglycerate kinase [Clytia hemisphaerica] diamond 1581 117 0.991452991452991 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
28569731 28569731 PRJNA797475_P_NODE_26767_length_245_cov_0.895349_g26668_i0 PRJNA797475 26767 245 0.895349 2.19360505 Tetracapsuloides bryosalmonae 271932 Cnidaria other_Eukaryota 77 1.68e-15   NR QKY88666.1 271932 g26668 i0 56.7 0.73469387755102 60 26 73.5 0 181 2 8 67 QKY88666.1 ribosomal protein L-12 [Tetracapsuloides bryosalmonae] diamond 180 77 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Malacovalvulida Saccosporidae Tetracapsuloides Tetracapsuloides bryosalmonae
30370301 30370301 PRJNA797475_P_NODE_16932_length_273_cov_2.115000_g16833_i0 PRJNA797475 16932 273 2.115 5.77395 Acropora cervicornis 6130 Cnidaria other_Eukaryota 87 1.71e-19   NR KAK2556285.1 6130 g16833 i0 59.7 1.54945054945055 72 29 79.1 0 17 232 25 96 KAK2556285.1 60S acidic ribosomal protein P2 [Acropora cervicornis] diamond 423 87 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora cervicornis
30694862 30694862 PRJNA797475_P_NODE_22093_length_250_cov_1.740113_g21994_i0 PRJNA797475 22093 250 1.740113 4.3502825 Metazoa 33208 Cnidaria other_Eukaryota 103 7.509999999999999e-24   NR XP_065656638.1 6087 g21994 i0 62.7 3.984 83 30 99.6 1 249 1 276 357 XP_065656638.1 obg-like ATPase 1 isoform X2 [Hydra vulgaris] diamond 996 103 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
30938728 30938728 PRJNA797475_P_NODE_15254_length_282_cov_1.473684_g15155_i0 PRJNA797475 15254 282 1.473684 4.15578888 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 122 8.12e-30   NR XP_028404739.1 151771 g15155 i0 60.2 2.98936170212766 93 37 98.9 0 280 2 703 795 XP_028404739.1 lysosomal alpha-glucosidase-like [Dendronephthya gigantea] diamond 843 122 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
31136956 31136956 PRJNA797475_P_NODE_13055_length_296_cov_2.336323_g12956_i0 PRJNA797475 13055 296 2.336323 6.91551608 Metazoa 33208 Cnidaria other_Eukaryota 74.3 6e-14   NR KAF1741123.1 59785 g12956 i0 63.8 3.59797297297297 58 21 58.8 0 296 123 56 113 KAF1741123.1 hypothetical protein MXB_1517 [Myxobolus squamalis] diamond 1065 74.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
31286075 31286075 PRJNA797475_P_NODE_11495_length_313_cov_1.116667_g11396_i0 PRJNA797475 11495 313 1.116667 3.49516771 Actinia tenebrosa 6105 Cnidaria other_Eukaryota 80.9 2.22e-15   NR XP_031564934.1 6105 g11396 i0 43.2 1.84025559105431 95 53 91.1 1 297 13 273 366 XP_031564934.1 gelsolin-like protein 1 [Actinia tenebrosa] diamond 576 80.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
32718254 32718254 PRJNA797475_P_NODE_26540_length_245_cov_0.895349_g26441_i0 PRJNA797475 26540 245 0.895349 2.19360505 Metazoa 33208 Cnidaria other_Eukaryota 110 7.490000000000001e-26   NR XP_031562421.1 6105 g26441 i0 60.3 2.79183673469388 78 31 95.5 0 1 234 215 292 XP_031562421.1 ergothioneine biosynthesis protein 1-like isoform X2 [Actinia tenebrosa] diamond 684 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;