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contig_metadata

17 rows where bioproject = "PRJNA797475", tax_phylum = "Bdellovibrionota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 17 ✖

tax_phylum 1

  • Bdellovibrionota · 17 ✖

tax_kingdom 1

bioproject 1

  • PRJNA797475 · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3332426 3332426 PRJNA797475_P_NODE_19943_length_258_cov_1.248649_g19844_i0 PRJNA797475 19943 258 1.248649 3.22151442 Peredibacter starrii 28202 Bacteria Bacteria 459 1.18e-124   NTclustered gi|2631252187|gb|CP139487.1| 28202 g19844 i0 98.837 194.410852713178 258 1 99 1 3 258 511962 511705 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 50158 459 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
5884865 5884865 PRJNA797475_P_NODE_16685_length_275_cov_1.153465_g16586_i0 PRJNA797475 16685 275 1.153465 3.17202875 uncultured Oligoflexales bacterium 2735263 Bacteria Bacteria 265 2.9799999999999995e-66   NTclustered gi|2531963191|emb|OY282434.1| 2735263 g16586 i0 84.058 94.6727272727273 276 43 100 1 1 275 955395 955120 MAG: uncultured Oligoflexales bacterium genome assembly, chromosome: 1 blastn 26035 265 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales     uncultured Oligoflexales bacterium
5885103 5885103 PRJNA797475_P_NODE_7445_length_374_cov_3.275748_g7346_i0 PRJNA797475 7445 374 3.275748 12.25129752 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 196 6.51e-60   NR MCB0369725.1 2053517 g7346 i0 76.5 0.954545454545455 119 28 95.5 0 16 372 10 128 MCB0369725.1 hypothetical protein [Bdellovibrionales bacterium] diamond 357 196 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
26904884 26904884 PRJNA797475_P_NODE_25261_length_247_cov_0.885057_g25162_i0 PRJNA797475 25261 247 0.885057 2.18609079 Bacteria 2 Bacteria Bacteria 123 2.06e-30   NR MCM2348451.1 2081706 g25162 i0 68.3 1.9919028340081 82 26 99.6 0 2 247 963 1044 MCM2348451.1 hypothetical protein [Bacteriovoracaceae bacterium] diamond 492 123 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
27527811 27527811 PRJNA797475_P_NODE_24543_length_248_cov_0.880000_g24444_i0 PRJNA797475 24543 248 0.88 2.1824 Peredibacter starrii 28202 Bacteria Bacteria 105 5.51e-25   NR WP_321393691.1 28202 g24444 i0 90.2 0.737903225806452 61 6 73.8 0 2 184 314 374 WP_321393691.1 DUF1385 domain-containing protein [Peredibacter starrii] diamond 183 105 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
27622751 27622751 PRJNA797475_P_NODE_6224_length_405_cov_1.259036_g6126_i0 PRJNA797475 6224 405 1.259036 5.0990958 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 209 1.5099999999999998e-67   NR MCB0370659.1 2053517 g6126 i0 97.3 0.814814814814815 110 3 81.5 0 2 331 2 111 MCB0370659.1 hypothetical protein [Bdellovibrionales bacterium] diamond 330 209 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28262978 28262978 PRJNA797475_P_NODE_27406_length_244_cov_0.900585_g27307_i0 PRJNA797475 27406 244 0.900585 2.1974274 Bacteria 2 Bacteria Bacteria 139 5.49e-36   NR MCM2350982.1 2081706 g27307 i0 90 2.95081967213115 80 8 98.4 0 242 3 914 993 MCM2350982.1 efflux RND transporter permease subunit [Bacteriovoracaceae bacterium] diamond 720 140 0.992857142857143 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28380335 28380335 PRJNA797475_P_NODE_8646_length_352_cov_1.512545_g8547_i0 PRJNA797475 8646 352 1.512545 5.3241584 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 178 8.269999999999997e-55   NR MCB0369646.1 2053517 g8547 i0 86 0.852272727272727 100 14 85.2 0 51 350 46 145 MCB0369646.1 50S ribosomal protein L22 [Bdellovibrionales bacterium] diamond 300 178 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28538454 28538454 PRJNA797475_P_NODE_25987_length_246_cov_0.890173_g25888_i0 PRJNA797475 25987 246 0.890173 2.18982558 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 146 1.99e-39   NR MCB0370360.1 2053517 g25888 i0 90.1 0.98780487804878 81 8 98.8 0 1 243 306 386 MCB0370360.1 HAD-IC family P-type ATPase [Bdellovibrionales bacterium] diamond 243 146 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28569728 28569728 PRJNA797475_P_NODE_14007_length_289_cov_1.254630_g13908_i0 PRJNA797475 14007 289 1.25463 3.6258807 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 144 6.889999999999998e-41   NR MBA2404823.1 2053517 g13908 i0 72 0.965397923875433 93 26 96.5 0 282 4 34 126 MBA2404823.1 M4 family metallopeptidase [Bdellovibrionales bacterium] diamond 279 144 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28633165 28633165 PRJNA797475_P_NODE_29867_length_241_cov_1.375000_g29768_i0 PRJNA797475 29867 241 1.375 3.31375 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 131 2.39e-34   NR MCB0368368.1 2053517 g29768 i0 81.3 0.995850622406639 80 15 99.6 0 241 2 135 214 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 240 131 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29201420 29201420 PRJNA797475_P_NODE_24409_length_248_cov_0.880000_g24310_i0 PRJNA797475 24409 248 0.88 2.1824 Bacteriovoracia bacterium 3058048 Bacteria Bacteria 138 7.14e-38   NR MFP5387464.1 3058048 g24310 i0 74.1 0.979838709677419 81 21 98 0 1 243 226 306 MFP5387464.1 ABC transporter ATP-binding protein [Bacteriovoracia bacterium] diamond 243 138 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia       Bacteriovoracia bacterium
29652020 29652020 PRJNA797475_P_NODE_26870_length_245_cov_0.895349_g26771_i0 PRJNA797475 26870 245 0.895349 2.19360505 Peredibacter 263370 Bacteria Bacteria 126 2.06e-32   NR WP_321398322.1 28202 g26771 i0 75.3 1.98367346938776 81 20 99.2 0 244 2 10 90 WP_321398322.1 diaminopimelate decarboxylase [Peredibacter starrii] diamond 486 127 0.992125984251969 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
30654085 30654085 PRJNA797475_P_NODE_12233_length_305_cov_1.327586_g12134_i0 PRJNA797475 12233 305 1.327586 4.0491373 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 122 1.19e-30   NR MCB0369454.1 2053517 g12134 i0 56.3 1.01311475409836 103 39 95.4 1 13 303 11 113 MCB0369454.1 hypothetical protein [Bdellovibrionales bacterium] diamond 309 122 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31001844 31001844 PRJNA797475_P_NODE_8834_length_349_cov_1.115942_g8735_i0 PRJNA797475 8834 349 1.115942 3.89463758 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 120 8.13e-32   NR MCB0369154.1 2053517 g8735 i0 67.9 0.696275071633238 81 26 69.6 0 344 102 46 126 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 243 120 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32077038 32077038 PRJNA797475_P_NODE_27398_length_244_cov_1.140351_g27299_i0 PRJNA797475 27398 244 1.140351 2.78245644 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 68.9 2.19e-11   NR MCM2349899.1 2081706 g27299 i0 39.3 1.09426229508197 89 41 93.4 1 17 244 184 272 MCM2349899.1 phospholipase D family protein [Bacteriovoracaceae bacterium] diamond 267 68.9 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
32235572 32235572 PRJNA797475_P_NODE_17938_length_268_cov_1.579487_g17839_i0 PRJNA797475 17938 268 1.579487 4.23302516 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 139 1.1099999999999999e-39   NR MCB0369154.1 2053517 g17839 i0 74.1 0.951492537313433 85 22 95.1 0 256 2 1 85 MCB0369154.1 C39 family peptidase [Bdellovibrionales bacterium] diamond 255 139 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;