RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA797475", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 4 ✖

tax_kingdom 1

  • Metazoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA797475 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5885085 5885085 PRJNA797475_P_NODE_5705_length_421_cov_7.629310_g5607_i0 PRJNA797475 5705 421 7.62931 32.1193951 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 693 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g5607 i0 97.304 0.969121140142518 408 11 97 0 2 409 17 424 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 408 693 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
18633022 18633022 PRJNA797475_P_NODE_30555_length_241_cov_0.880952_g30456_i0 PRJNA797475 30555 241 0.880952 2.12309432 Trematoda 6178 Platyhelminthes Platyhelminthes 137 4.849999999999999e-37   NR TPP58124.1 46835 g30456 i0 72.5 4.9792531120332 80 22 99.6 0 2 241 235 314 TPP58124.1 Pyruvate dehydrogenase E1 component subunit alpha mitochondrial [Fasciola gigantica] diamond 1200 137 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola gigantica
27812249 27812249 PRJNA797475_P_NODE_29144_length_242_cov_0.911243_g29045_i0 PRJNA797475 29144 242 0.911243 2.20520806 Fasciola hepatica 6192 Platyhelminthes Platyhelminthes 121 1.3899999999999998e-32   NR THD22758.1 6192 g29045 i0 67.9 0.966942148760331 78 25 96.7 0 235 2 6 83 THD22758.1 Ribosomal protein rpl13a [Fasciola hepatica] diamond 234 121 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
29201422 29201422 PRJNA797475_P_NODE_5489_length_429_cov_1.901685_g5391_i0 PRJNA797475 5489 429 1.901685 8.15822865 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 64.3 7.64e-9   NR PAA93605.1 282301 g5391 i0 33 1.44055944055944 103 68 72 1 321 13 328 429 PAA93605.1 hypothetical protein BOX15_Mlig031413g1 [Macrostomum lignano] diamond 618 64.3 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;