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contig_metadata

20 rows where bioproject = "PRJNA797475", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 20 ✖

tax_kingdom 1

  • Metazoa · 20 ✖

tax_clade 1

bioproject 1

  • PRJNA797475 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2057178 2057178 PRJNA797475_P_NODE_15382_length_281_cov_2.197115_g15283_i0 PRJNA797475 15382 281 2.197115 6.17389315 Caenorhabditis briggsae 6238 Nematoda Nematoda 102 8.01e-26   NR XP_002639762.1 6238 g15283 i0 69.4 0.768683274021352 72 22 76.9 0 217 2 16 87 XP_002639762.1 Protein CBR-RPL-30 [Caenorhabditis briggsae] diamond 216 102 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
3332470 3332470 PRJNA797475_P_NODE_23303_length_249_cov_0.875000_g23204_i0 PRJNA797475 23303 249 0.875 2.17875 Caenorhabditis elegans 6239 Nematoda Nematoda 460 3.16e-125   NTclustered gi|687865928|emb|LK927994.1| 6239 g23204 i0 100 3 249 0 100 0 1 249 59271 59023 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000393 blastn 747 460 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
8434544 8434544 PRJNA797475_P_NODE_23327_length_249_cov_0.875000_g23228_i0 PRJNA797475 23327 249 0.875 2.17875 Sudhausia aristotokia 1357959 Nematoda Nematoda 122 1.69e-23   NTclustered gi|675118807|gb|KJ877278.1| 1357959 g23228 i0 79.255 52.0120481927711 188 30 73 9 38 220 1421 1604 Sudhausia aristotokia strain RS9011 28S ribosomal RNA gene, partial sequence blastn 12951 122 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Diplogasteridae Sudhausia Sudhausia aristotokia
10985299 10985299 PRJNA797475_P_NODE_14569_length_286_cov_1.248826_g14470_i0 PRJNA797475 14569 286 1.248826 3.57164236 Steinernema carpocapsae 34508 Nematoda Nematoda 99.4 2.28e-22   NR TKR96790.1 34508 g14470 i0 59.1 0.692307692307692 66 27 69.2 0 3 200 119 184 TKR96790.1 hypothetical protein L596_010761 [Steinernema carpocapsae] diamond 198 99.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
14809930 14809930 PRJNA797475_P_NODE_21672_length_251_cov_0.865169_g21573_i0 PRJNA797475 21672 251 0.865169 2.17157419 Caenorhabditis elegans 6239 Nematoda Nematoda 459 1.1499999999999996e-124   NTclustered gi|351060592|emb|FO080992.1| 6239 g21573 i0 99.602 3 251 1 100 0 1 251 10369 10619 Caenorhabditis elegans YAC Y119C1B, complete sequence blastn 753 459 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
16083952 16083952 PRJNA797475_P_NODE_22733_length_250_cov_0.870056_g22634_i0 PRJNA797475 22733 250 0.870056 2.17514 Caenorhabditis elegans 6239 Nematoda Nematoda 462 8.83e-126   NTclustered gi|687865721|emb|LK927708.1| 6239 g22634 i0 100 47.104 250 0 100 0 1 250 369 120 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000155 blastn 11776 462 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
16083976 16083976 PRJNA797475_P_NODE_24533_length_248_cov_0.880000_g24434_i0 PRJNA797475 24533 248 0.88 2.1824 Caenorhabditis elegans 6239 Nematoda Nematoda 459 1.13e-124   NTclustered gi|1972262700|ref|NM_065509.9| 6239 g24434 i0 100 6.62096774193548 248 0 100 0 1 248 514 761 Caenorhabditis elegans Small ribosomal subunit protein eS1 (rps-3A), mRNA blastn 1642 459 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
19908176 19908176 PRJNA797475_P_NODE_19276_length_261_cov_2.632979_g19177_i0 PRJNA797475 19276 261 2.632979 6.87207519 Caenorhabditis elegans 6239 Nematoda Nematoda 475 1.1899999999999999e-129   NTclustered gi|1972230171|ref|NM_001392490.1| 6239 g19177 i0 99.615 3.04980842911877 260 1 99 0 1 260 261 2 Caenorhabditis elegans Small integral membrane protein 15 (C48B6.10), mRNA blastn 796 475 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
19908239 19908239 PRJNA797475_P_NODE_23916_length_248_cov_1.320000_g23817_i0 PRJNA797475 23916 248 1.32 3.2736 Caenorhabditis elegans 6239 Nematoda Nematoda 459 1.13e-124   NTclustered gi|1734338622|ref|NM_076012.6| 6239 g23817 i0 100 96.5564516129032 248 0 100 0 1 248 371 124 Caenorhabditis elegans Large ribosomal subunit protein uL5B (rpl-11.2), mRNA blastn 23946 459 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
22458546 22458546 PRJNA797475_P_NODE_23258_length_249_cov_0.875000_g23159_i0 PRJNA797475 23258 249 0.875 2.17875 Caenorhabditis elegans 6239 Nematoda Nematoda 460 3.16e-125   NTclustered gi|1734326521|ref|NM_066550.4| 6239 g23159 i0 100 2.97991967871486 249 0 100 0 1 249 697 449 Caenorhabditis elegans Malectin domain-containing protein (F44E2.10), partial mRNA blastn 742 460 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
22894594 22894594 PRJNA797475_P_NODE_6078_length_409_cov_11.377976_g5980_i0 PRJNA797475 6078 409 11.377976 46.53592184 root 1 Root_unresolved Root_unresolved 185 2.28e-57   NR CDW60131.1 36087 g5980 i0 62.5 2.99266503667482 136 51 99.8 0 2 409 1 136 CDW60131.1 60S ribosomal protein L27a [Trichuris trichiura] diamond 1224 186 0.99462365591397806 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
23734237 23734237 PRJNA797475_P_NODE_25439_length_247_cov_0.885057_g25340_i0 PRJNA797475 25439 247 0.885057 2.18609079 Caenorhabditis elegans 6239 Nematoda Nematoda 457 4.05e-124   NTclustered gi|687865583|emb|LK927625.1| 6239 g25340 i0 100 4 247 0 100 0 1 247 87779 88025 Caenorhabditis elegans genome assembly C_elegans_Bristol_N2_v1_5_4 ,scaffold CELN2_scaffold0000086 blastn 988 457 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
25007781 25007781 PRJNA797475_P_NODE_20880_length_253_cov_1.422222_g20781_i0 PRJNA797475 20880 253 1.422222 3.59822166 Caenorhabditis elegans 6239 Nematoda Nematoda 462 8.95e-126   NTclustered gi|1972236089|ref|NM_001383766.2| 6239 g20781 i0 99.605 8.09090909090909 253 1 100 0 1 253 288 36 Caenorhabditis elegans Small ribosomal subunit protein eS26 (rps-26), mRNA blastn 2047 462 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27148290 27148290 PRJNA797475_P_NODE_7442_length_374_cov_4.202658_g7343_i0 PRJNA797475 7442 374 4.202658 15.71794092 Dirofilaria immitis 6287 Nematoda Nematoda 60.5 9.55e-8   NR MCP9258340.1 6287 g7343 i0 42.4 2.55080213903743 66 38 52.9 0 286 89 352 417 MCP9258340.1 Acyl-CoA-binding domain-containing protein 6 [Dirofilaria immitis] diamond 954 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Dirofilaria Dirofilaria immitis
28506685 28506685 PRJNA797475_P_NODE_7187_length_380_cov_1.504886_g7088_i0 PRJNA797475 7187 380 1.504886 5.7185668 Trichuris trichiura 36087 Nematoda Nematoda 174 3.99e-53   NR CDW60131.1 36087 g7088 i0 61.9 6.86842105263158 126 48 99.5 0 3 380 6 131 CDW60131.1 60S ribosomal protein L27a [Trichuris trichiura] diamond 2610 174 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
29012161 29012161 PRJNA797475_P_NODE_18328_length_266_cov_1.994819_g18229_i0 PRJNA797475 18328 266 1.994819 5.30621854 Anisakis simplex 6269 Nematoda Nematoda 58.2 1.42e-8   NR VDK28727.1 6269 g18229 i0 44.6 2.21052631578947 65 33 69.9 1 79 264 31 95 VDK28727.1 unnamed protein product [Anisakis simplex] diamond 588 58.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
29052642 29052642 PRJNA797475_P_NODE_29728_length_241_cov_2.285714_g29629_i0 PRJNA797475 29728 241 2.285714 5.50857074 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 8.29e-25   NR VBB30137.1 6277 g29629 i0 69 53.1908713692946 71 22 88.4 0 27 239 574 644 VBB30137.1 unnamed protein product [Acanthocheilonema viteae] diamond 12819 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
30631549 30631549 PRJNA797475_P_NODE_7773_length_368_cov_1.044068_g7674_i0 PRJNA797475 7773 368 1.044068 3.84217024 Metazoa 33208 Nematoda Nematoda 46.6 0.00486   NR CAL2034575.1 135651 g7674 i0 47.8 1.5570652173913 46 21 35.9 2 357 226 124 168 CAL2034575.1 unnamed protein product [Caenorhabditis brenneri] diamond 573 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
32362073 32362073 PRJNA797475_P_NODE_24419_length_248_cov_0.880000_g24320_i0 PRJNA797475 24419 248 0.88 2.1824 Acanthocheilonema viteae 6277 Nematoda Nematoda 52.4 7.83e-6   NR VBB28430.1 6277 g24320 i0 54.7 2.56451612903226 53 24 64.1 0 2 160 140 192 VBB28430.1 unnamed protein product [Acanthocheilonema viteae] diamond 636 52.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Acanthocheilonema Acanthocheilonema viteae
32614703 32614703 PRJNA797475_P_NODE_17520_length_270_cov_2.345178_g17421_i0 PRJNA797475 17520 270 2.345178 6.3319806 Pristionchus pacificus 54126 Nematoda Nematoda 48.9 4.17e-5   NR KAF8374309.1 54126 g17421 i0 38.3 0.666666666666667 60 33 66.7 1 181 2 34 89 KAF8374309.1 dlc-2 [Pristionchus pacificus] diamond 180 48.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;