RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA797475", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA797475 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19908380 19908380 PRJNA797475_P_NODE_7436_length_375_cov_1.019868_g7337_i0 PRJNA797475 7436 375 1.019868 3.824505 Anneissia japonica 1529436 Echinodermata other_Eukaryota 182 2.84e-56   NR XP_033112611.1 1529436 g7337 i0 76.1 16.256 113 27 90.4 0 35 373 1 113 XP_033112611.1 60S ribosomal protein L12-like [Anneissia japonica] diamond 6096 182 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
28579007 28579007 PRJNA797475_P_NODE_3707_length_513_cov_1.713636_g3609_i0 PRJNA797475 3707 513 1.713636 8.79095268 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 174 2.34e-51   NR XP_030830317.1 7668 g3609 i0 63.3 8.83040935672515 150 53 87.1 2 450 4 12 160 XP_030830317.1 60S ribosomal protein L7 [Strongylocentrotus purpuratus] diamond 4530 175 0.994285714285714 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
30307178 30307178 PRJNA797475_P_NODE_4752_length_458_cov_3.724675_g4654_i0 PRJNA797475 4752 458 3.724675 17.0590115 Apostichopus japonicus 307972 Echinodermata other_Eukaryota 81.3 1.67e-16   NR AFU36096.1 307972 g4654 i0 35.7 0.825327510917031 126 77 80.6 3 7 375 1 125 AFU36096.1 profilin [Apostichopus japonicus] diamond 378 81.3 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Stichopodidae Apostichopus Apostichopus japonicus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;