RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA797475", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA797475 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14809973 14809973 PRJNA797475_P_NODE_24732_length_247_cov_1.689655_g24633_i0 PRJNA797475 24732 247 1.689655 4.17344785 Catenariaceae sp. 3036389 Fungi Fungi 418 1.9099999999999998e-112   NTclustered gi|2468790846|gb|OQ702867.1| 3036389 g24633 i0 97.551 50.1012145748988 245 5 99 1 3 247 3334 3091 Catenariaceae sp. isolate PSC066 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12375 418 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae   Catenariaceae sp.
17359774 17359774 PRJNA797475_P_NODE_19714_length_259_cov_1.655914_g19615_i0 PRJNA797475 19714 259 1.655914 4.28881726 Blastocladiella britannica 64508 Fungi Fungi 70.5 3.27e-12   NR KAI9224529.1 64508 g19615 i0 54.7 7.69111969111969 64 29 74.1 0 259 68 158 221 KAI9224529.1 20S proteasome subunit alpha 6 [Blastocladiella britannica] diamond 1992 70.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
27062980 27062980 PRJNA797475_P_NODE_7842_length_366_cov_5.443686_g7743_i0 PRJNA797475 7842 366 5.443686 19.92389076 Fungi 4751 Fungi Fungi 121 7.26e-33   NR KAI9221418.1 64508 g7743 i0 59.8 4.77049180327869 97 39 79.5 0 343 53 14 110 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 1746 122 0.991803278688525 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
28664586 28664586 PRJNA797475_P_NODE_30807_length_234_cov_2.788820_g30708_i0 PRJNA797475 30807 234 2.78882 6.5258388 Paraphysoderma sedebokerense 1500003 Fungi Fungi 65.9 2.65e-11   NR KAI9140483.1 1500003 g30708 i0 41.1 2.73076923076923 73 43 93.6 0 233 15 39 111 KAI9140483.1 eukaryotic translation initiation factor 5A [Paraphysoderma sedebokerense] diamond 639 65.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
29674540 29674540 PRJNA797475_P_NODE_8050_length_362_cov_4.806228_g7951_i0 PRJNA797475 8050 362 4.806228 17.39854536 Catenaria anguillulae PL171 765915 Fungi Fungi 113 2.06e-29   NR ORZ39709.1 765915 g7951 i0 49.6 1.87292817679558 113 57 93.6 0 22 360 6 118 ORZ39709.1 ribosomal protein L14-domain-containing protein [Catenaria anguillulae PL171] diamond 678 113 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
32866511 32866511 PRJNA797475_P_NODE_6420_length_399_cov_3.033742_g6321_i0 PRJNA797475 6420 399 3.033742 12.10463058 Allomyces arbusculus 64504 Fungi Fungi 175 1.0999999999999999e-53   NR KAJ3373363.1 64504 g6321 i0 69 2.90225563909774 129 40 97 0 388 2 2 130 KAJ3373363.1 60S ribosomal protein L32 [Allomyces arbusculus] diamond 1158 175 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;