RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA797475", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Sysuimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Sysuimicrobiota · 1 ✖

tax_kingdom 1

  • Bacillati · 1 ✖

bioproject 1

  • PRJNA797475 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5884847 5884847 PRJNA797475_P_NODE_14585_length_286_cov_1.150235_g14486_i0 PRJNA797475 14585 286 1.150235 3.2896721 Candidatus Fervidifonticultor primus 3378012 Bacteria Bacteria 122 3.0399999999999996e-31   NR MDR7555996.1 3378012 g14486 i0 84.8 4.81468531468532 66 10 69.2 0 198 1 1 66 MDR7555996.1 GDP-mannose 4,6-dehydratase [Candidatus Fervidifonticultor primus] diamond 1377 122 1 Bacteria   Bacillati Candidatus Sysuimicrobiota Candidatus Sysuimicrobiia Candidatus Sysuimicrobiales Candidatus Humicultoraceae Candidatus Fervidifonticultor Candidatus Fervidifonticultor primus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;