RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA797475", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA797475 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6320963 6320963 PRJNA797475_P_NODE_19525_length_260_cov_1.647059_g19426_i0 PRJNA797475 19525 260 1.647059 4.2823534 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 107 1.44e-25   NR KAF4669530.1 32597 g19426 i0 71.6 1.70769230769231 74 19 84.2 2 252 34 107 179 KAF4669530.1 hypothetical protein FOL46_001353 [Perkinsus olseni] diamond 444 107 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
21183988 21183988 PRJNA797475_P_NODE_5337_length_435_cov_2.859116_g5239_i0 PRJNA797475 5337 435 2.859116 12.4371546 Perkinsus marinus 31276 SAR_Eukaryotes SAR_Eukaryotes 313 1.75e-80   NTclustered gi|294889472|ref|XM_002772784.1| 423536 g5239 i0 82.143 20.0597701149425 364 65 84 0 16 379 431 68 Perkinsus marinus ATCC 50983 translation elongation factor EF-1, subunit alpha,, putative, mRNA blastn 8726 313 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;