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contig_metadata

30 rows where bioproject = "PRJNA797475", tax_clade = "Sar" and tax_phylum = "Oomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Oomycota · 30 ✖

tax_clade 1

  • Sar · 30 ✖

bioproject 1

  • PRJNA797475 · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
781276 781276 PRJNA797475_P_NODE_12501_length_302_cov_1.344978_g12402_i0 PRJNA797475 12501 302 1.344978 4.06183356 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 213 1.22e-50   NTclustered gi|698791735|ref|XM_009830598.1| 112090 g12402 i0 80.405 19.953642384106 296 45 95 11 12 299 168 458 Aphanomyces astaci malate dehydrogenase, NAD-dependent mRNA blastn 6026 213 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
7159923 7159923 PRJNA797475_P_NODE_8426_length_356_cov_1.084806_g8327_i0 PRJNA797475 8426 356 1.084806 3.86190936 Albugo laibachii Nc14 890382 SAR_Eukaryotes SAR_Eukaryotes 134 1.3e-35   NR CCA21679.1 890382 g8327 i0 70.2 18.1516853932584 114 33 96.1 1 348 7 33 145 CCA21679.1 ubiquitin extension protein putative [Albugo laibachii Nc14] diamond 6462 134 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
9709795 9709795 PRJNA797475_P_NODE_4628_length_464_cov_2.140665_g4530_i0 PRJNA797475 4628 464 2.140665 9.9326856 Phytophthora ramorum 164328 SAR_Eukaryotes SAR_Eukaryotes 239 3.22e-58   NTclustered gi|2794883434|ref|XM_067881304.1| 164328 g4530 i0 77.751 13.2801724137931 418 73 88 14 47 454 630 223 Phytophthora ramorum 60S ribosomal protein L7 (KRP23_1099), partial mRNA blastn 6162 239 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum
10145502 10145502 PRJNA797475_P_NODE_9708_length_335_cov_4.179389_g9609_i0 PRJNA797475 9708 335 4.179389 14.00095315 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 143 1.82e-29   NTclustered gi|2795051631|ref|XM_067944120.1| 4785 g9609 i0 81.461 40.4955223880597 178 29 53 4 152 327 368 193 Phytophthora cinnamomi 60S ribosomal protein L18a (IUM83_19091), partial mRNA blastn 13566 143 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
14810005 14810005 PRJNA797475_P_NODE_26612_length_245_cov_0.895349_g26513_i0 PRJNA797475 26612 245 0.895349 2.19360505 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 67.6 7.9e-7   NTclustered gi|2795017041|ref|XM_067930511.1| 4785 g26513 i0 84.848 0.387755102040816 66 10 27 0 180 245 949 884 Phytophthora cinnamomi papain-like cysteine protease C1 (IUM83_06316), partial mRNA blastn 95 67.6 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
16083891 16083891 PRJNA797475_P_NODE_18273_length_267_cov_1.185567_g18174_i0 PRJNA797475 18273 267 1.185567 3.16546389 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 130 8.88e-33   NR KAJ0412157.1 114742 g18174 i0 72.1 10.6404494382022 86 24 96.6 0 7 264 619 704 KAJ0412157.1 hypothetical protein ATCC90586_005770 [Pythium insidiosum] diamond 2841 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
17359786 17359786 PRJNA797475_P_NODE_21354_length_251_cov_0.865169_g21255_i0 PRJNA797475 21354 251 0.865169 2.17157419 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 169 2.1599999999999996e-37   NTclustered gi|2795037266|ref|XM_067927329.1| 4785 g21255 i0 79.216 3.04382470119522 255 43 99 10 2 251 402 153 Phytophthora cinnamomi 60S ribosomal protein L7 (IUM83_03338), partial mRNA blastn 764 169 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
22894596 22894596 PRJNA797475_P_NODE_6958_length_385_cov_2.256410_g6859_i0 PRJNA797475 6958 385 2.25641 8.6871785 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 226 2.0499999999999995e-54   NTclustered gi|2795032696|ref|XM_067933028.1| 4785 g6859 i0 80.903 73.7532467532468 288 53 75 2 41 327 311 25 Phytophthora cinnamomi cytochrome c (IUM83_08641), partial mRNA blastn 28395 226 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
27189303 27189303 PRJNA797475_P_NODE_17482_length_271_cov_1.166667_g17383_i0 PRJNA797475 17482 271 1.166667 3.16166757 root 1 Root_unresolved Root_unresolved 84.3 1.16e-16   NR CCA23253.1 890382 g17383 i0 55.8 18.9741697416974 86 32 95.2 2 259 2 9 88 CCA23253.1 unnamed protein product putative [Albugo laibachii Nc14] diamond 5142 84.3 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
27252565 27252565 PRJNA797475_P_NODE_21663_length_251_cov_0.865169_g21564_i0 PRJNA797475 21663 251 0.865169 2.17157419 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0135   NR KAF0698642.1 120398 g21564 i0 38.5 1.24302788844622 52 31 62.2 1 197 42 99 149 KAF0698642.1 hypothetical protein As57867_010696 [Aphanomyces stellatus] diamond 312 43.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
27410918 27410918 PRJNA797475_P_NODE_22723_length_250_cov_0.870056_g22624_i0 PRJNA797475 22723 250 0.870056 2.17514 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 79 7.2e-15   NR RQM30367.1 112090 g22624 i0 53 2.988 83 36 99.6 1 1 249 233 312 RQM30367.1 hypothetical protein B5M09_012733 [Aphanomyces astaci] diamond 747 79.7 0.991217063989962 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
27464845 27464845 PRJNA797475_P_NODE_12963_length_297_cov_2.013393_g12864_i0 PRJNA797475 12963 297 2.013393 5.97977721 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 87 3.73e-18   NR TYZ60440.1 1485010 g12864 i0 45.7 1.81818181818182 92 50 92.9 0 1 276 185 276 TYZ60440.1 hypothetical protein PybrP1_009390, partial [[Pythium] brassicae (nom. inval.)] diamond 540 87 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
27843439 27843439 PRJNA797475_P_NODE_20304_length_256_cov_1.595628_g20205_i0 PRJNA797475 20304 256 1.595628 4.08480768 [Pythium] brassicae (nom. inval.) 1485010 SAR_Eukaryotes SAR_Eukaryotes 75.9 9.65e-14   NR TYZ59423.1 1485010 g20205 i0 67.3 3.66796875 52 17 60.9 0 249 94 742 793 TYZ59423.1 hypothetical protein PybrP1_001044 [[Pythium] brassicae (nom. inval.)] diamond 939 75.9 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Globisporangium [Pythium] brassicae (nom. inval.)
28001630 28001630 PRJNA797475_P_NODE_14925_length_284_cov_1.369668_g14826_i0 PRJNA797475 14925 284 1.369668 3.88985712 Phytophthora fragariae 53985 SAR_Eukaryotes SAR_Eukaryotes 130 2.15e-36   NR KAE8911393.1 53985 g14826 i0 65.2 6.80281690140845 92 32 97.2 0 282 7 2 93 KAE8911393.1 hypothetical protein PF003_g4481 [Phytophthora fragariae] diamond 1932 130 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora fragariae
28010796 28010796 PRJNA797475_P_NODE_27425_length_244_cov_0.900585_g27326_i0 PRJNA797475 27425 244 0.900585 2.1974274 Saprolegniales 4763 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0154   NR OQR93166.1 74557 g27326 i0 36.4 3.31967213114754 55 34 66.4 1 243 82 1775 1829 OQR93166.1 ATP-binding Cassette (ABC) Superfamily [Thraustotheca clavata] diamond 810 44.3 0.99097065462754 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
28127876 28127876 PRJNA797475_P_NODE_30305_length_241_cov_0.916667_g30206_i0 PRJNA797475 30305 241 0.916667 2.20916747 Albugo candida 65357 SAR_Eukaryotes SAR_Eukaryotes 89.7 9.97e-20   NR CCI48286.1 65357 g30206 i0 57.1 4.35684647302905 70 29 85.9 1 30 236 20 89 CCI48286.1 unnamed protein product [Albugo candida] diamond 1050 89.7 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo candida
29043582 29043582 PRJNA797475_P_NODE_21628_length_251_cov_0.865169_g21529_i0 PRJNA797475 21628 251 0.865169 2.17157419 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 57.8 2.07e-7   NR TMW62181.1 41045 g21529 i0 36.8 0.908366533864542 76 46 90.8 2 3 230 431 504 TMW62181.1 hypothetical protein Poli38472_009674 [Pythium oligandrum] diamond 228 57.8 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
29052641 29052641 PRJNA797475_P_NODE_16408_length_276_cov_1.517241_g16309_i0 PRJNA797475 16408 276 1.517241 4.18758516 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 135 3.43e-35   NR TMW58925.1 41045 g16309 i0 74.4 33.2608695652174 90 23 97.8 0 274 5 55 144 TMW58925.1 hypothetical protein Poli38472_007070 [Pythium oligandrum] diamond 9180 136 0.992647058823529 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum
30094439 30094439 PRJNA797475_P_NODE_25792_length_246_cov_0.890173_g25693_i0 PRJNA797475 25792 246 0.890173 2.18982558 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.00313   NR POM60699.1 4796 g25693 i0 60.5 4.1219512195122 38 15 46.3 0 111 224 454 491 POM60699.1 Pyridoxal phosphate phosphatase [Phytophthora palmivora] diamond 1014 46.2 0.991341991341991 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
30116960 30116960 PRJNA797475_P_NODE_26552_length_245_cov_0.895349_g26453_i0 PRJNA797475 26552 245 0.895349 2.19360505 Phytophthora cactorum 29920 SAR_Eukaryotes SAR_Eukaryotes 47 0.00124   NR KAF1789355.1 29920 g26453 i0 38.8 0.6 49 30 60 0 5 151 336 384 KAF1789355.1 Strictosidine synthase, conserved region [Phytophthora cactorum] diamond 147 47 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cactorum
30307172 30307172 PRJNA797475_P_NODE_15212_length_282_cov_1.875598_g15113_i0 PRJNA797475 15212 282 1.875598 5.28918636 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 94 2.03e-21   NR XP_008864521.1 157072 g15113 i0 65.7 0.712765957446808 67 23 71.3 0 82 282 5 71 XP_008864521.1 hypothetical protein H310_02702 [Aphanomyces invadans] diamond 201 94 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
30347874 30347874 PRJNA797475_P_NODE_11192_length_316_cov_2.518519_g11093_i0 PRJNA797475 11192 316 2.518519 7.95852004 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 141 9.91e-41   NR KAF0738771.1 100861 g11093 i0 70.5 8.11708860759494 95 28 90.2 0 32 316 17 111 KAF0738771.1 hypothetical protein Ae201684_005384 [Aphanomyces euteiches] diamond 2565 141 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
30559193 30559193 PRJNA797475_P_NODE_6513_length_397_cov_0.848765_g6414_i0 PRJNA797475 6513 397 0.848765 3.36959705 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 138 8.46e-39   NR KAJ0400417.1 114742 g6414 i0 56.7 2.8639798488665 127 54 95.2 1 389 12 22 148 KAJ0400417.1 hypothetical protein P43SY_001695 [Pythium insidiosum] diamond 1137 138 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
30875368 30875368 PRJNA797475_P_NODE_26194_length_246_cov_0.890173_g26095_i0 PRJNA797475 26194 246 0.890173 2.18982558 Phytophthora palmivora 4796 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.00225   NR POM63442.1 4796 g26095 i0 56.7 0.365853658536585 30 13 36.6 0 101 12 319 348 POM63442.1 Hypothetical protein PHPALM_21154 [Phytophthora palmivora] diamond 90 46.2 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
31159363 31159363 PRJNA797475_P_NODE_10355_length_327_cov_1.212598_g10256_i0 PRJNA797475 10355 327 1.212598 3.96519546 Thraustotheca clavata 74557 SAR_Eukaryotes SAR_Eukaryotes 50.4 2.08e-5   NR OQS05746.1 74557 g10256 i0 46.2 0.477064220183486 52 27 46.8 1 154 2 11 62 OQS05746.1 hypothetical protein THRCLA_20540 [Thraustotheca clavata] diamond 156 50.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Thraustotheca Thraustotheca clavata
31390368 31390368 PRJNA797475_P_NODE_18676_length_264_cov_2.738220_g18577_i0 PRJNA797475 18676 264 2.73822 7.2289008 Phytophthora 4783 SAR_Eukaryotes SAR_Eukaryotes 103 5.870000000000001e-26   NR KAE9027413.1 129364 g18577 i0 63 9.14772727272727 81 30 92 0 3 245 68 148 KAE9027413.1 hypothetical protein PR001_g11976 [Phytophthora rubi] diamond 2415 103 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora rubi
31864444 31864444 PRJNA797475_P_NODE_22357_length_250_cov_0.870056_g22258_i0 PRJNA797475 22357 250 0.870056 2.17514 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 127 9.57e-32   NR XP_008610586.1 1156394 g22258 i0 72 14.808 82 23 98.4 0 247 2 147 228 XP_008610586.1 hypothetical protein SDRG_06578 [Saprolegnia diclina VS20] diamond 3702 127 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
32330503 32330503 PRJNA797475_P_NODE_26199_length_246_cov_0.890173_g26100_i0 PRJNA797475 26199 246 0.890173 2.18982558 Phytophthora cinnamomi 4785 SAR_Eukaryotes SAR_Eukaryotes 70.1 1.85e-12   NR KAJ8550308.1 4785 g26100 i0 45.3 1.82926829268293 75 38 87.8 1 31 246 21 95 KAJ8550308.1 hypothetical protein ON010_g10762 [Phytophthora cinnamomi] diamond 450 70.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora cinnamomi
32583392 32583392 PRJNA797475_P_NODE_11839_length_309_cov_1.711864_g11740_i0 PRJNA797475 11839 309 1.711864 5.28965976 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 79 7.79e-16   NR XP_024575041.1 4781 g11740 i0 39.6 11.0582524271845 111 52 93.2 2 288 1 23 133 XP_024575041.1 40s ribosomal protein s7 [Plasmopara halstedii] diamond 3417 79 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
32677425 32677425 PRJNA797475_P_NODE_27340_length_244_cov_1.403509_g27241_i0 PRJNA797475 27340 244 1.403509 3.42456196 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 61.6 6.47e-9   NR OQR97156.1 1202772 g27241 i0 43 0.971311475409836 79 45 97.1 0 242 6 175 253 OQR97156.1 flagellar radial spoke protein [Achlya hypogyna] diamond 237 61.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;