RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA797475", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA797475 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32045480 32045480 PRJNA797475_P_NODE_10058_length_331_cov_1.124031_g9959_i0 PRJNA797475 10058 331 1.124031 3.72054261 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 78.6 2.72e-15   NR MCA9406268.1 2035772 g9959 i0 35.6 3.64350453172205 101 59 91.5 2 17 319 47 141 MCA9406268.1 DUF1579 domain-containing protein [Candidatus Omnitrophota bacterium] diamond 1206 78.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32835023 32835023 PRJNA797475_P_NODE_27560_length_244_cov_0.900585_g27461_i0 PRJNA797475 27560 244 0.900585 2.1974274 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 76.3 4.22e-16   NR MSR77670.1 2035772 g27461 i0 42.3 2.54508196721311 71 39 87.3 1 3 215 3 71 MSR77670.1 glutaredoxin 3 [Candidatus Omnitrophota bacterium] diamond 621 76.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;