RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA797475", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA797475 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27275210 27275210 PRJNA797475_P_NODE_6163_length_407_cov_1.275449_g6065_i0 PRJNA797475 6163 407 1.275449 5.19107743 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 43.1 0.0265   NR XP_067762115.1 348837 g6065 i0 37.5 0.412776412776413 56 34 41.3 1 163 330 41 95 XP_067762115.1 Dynein light chain [Spironucleus salmonicida] diamond 168 43.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
28736787 28736787 PRJNA797475_P_NODE_22987_length_249_cov_1.715909_g22888_i0 PRJNA797475 22987 249 1.715909 4.27261341 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 43.5 0.0213   NR CAK8799797.1 28002 g22888 i0 33.3 5.65060240963855 72 29 63.9 3 89 247 623 694 CAK8799797.1 HINF_078508 [Hexamita inflata] diamond 1407 43.9 0.990888382687927 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
29706037 29706037 PRJNA797475_P_NODE_22630_length_250_cov_0.870056_g22531_i0 PRJNA797475 22630 250 0.870056 2.17514 Giardia lamblia P15 658858 Fornicata other_Eukaryota 47 0.0013   NR EFO61049.1 658858 g22531 i0 37 2.676 73 41 86.4 3 34 249 173 241 EFO61049.1 VSP [Giardia lamblia P15] diamond 669 47 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
30821299 30821299 PRJNA797475_P_NODE_4974_length_449_cov_1.843085_g4876_i0 PRJNA797475 4974 449 1.843085 8.27545165 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 58.2 1.48e-6   NR TNJ29110.1 5742 g4876 i0 48.1 2.27839643652561 52 23 32.1 1 447 304 1315 1366 TNJ29110.1 High cysteine membrane protein [Giardia muris] diamond 1023 58.2 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;