RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA797475", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA797475 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27306890 27306890 PRJNA797475_P_NODE_3063_length_557_cov_2.016529_g2965_i0 PRJNA797475 3063 557 2.016529 11.23206653 Minisyncoccota bacterium 2053589 Bacteria Bacteria 95.5 4.3e-19   NR MEZ0209192.1 2053589 g2965 i0 31.9 0.980251346499102 182 112 93.7 6 556 35 428 605 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 546 95.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32077040 32077040 PRJNA797475_P_NODE_3878_length_504_cov_1.025522_g3780_i0 PRJNA797475 3878 504 1.025522 5.16863088 Minisyncoccota bacterium 2053589 Bacteria Bacteria 55.8 1.41e-5   NR MEZ0209192.1 2053589 g3780 i0 29.4 0.851190476190476 143 97 83.9 3 77 499 174 314 MEZ0209192.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 429 55.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32425120 32425120 PRJNA797475_P_NODE_12619_length_301_cov_1.328947_g12520_i0 PRJNA797475 12619 301 1.328947 4.00013047 Minisyncoccota bacterium 2053589 Bacteria Bacteria 79.3 6.24e-17   NR MDR3572201.1 2053589 g12520 i0 89.1 0.458471760797342 46 5 45.8 0 226 89 43 88 MDR3572201.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 138 79.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32866507 32866507 PRJNA797475_P_NODE_25120_length_247_cov_0.885057_g25021_i0 PRJNA797475 25120 247 0.885057 2.18609079 Minisyncoccota bacterium 2053589 Bacteria Bacteria 141 7.65e-39   NR HEY0948080.1 2053589 g25021 i0 87.7 0.983805668016194 81 10 98.4 0 3 245 126 206 HEY0948080.1 endolytic transglycosylase MltG [Candidatus Paceibacterota bacterium] diamond 243 141 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;