RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA797475", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA797475 · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4609673 4609673 PRJNA797475_P_NODE_1764_length_725_cov_1.773006_g1671_i0 PRJNA797475 1764 725 1.773006 12.8542935 Thecamonas trahens 529818 Root_unresolved Root_unresolved 339 4.97e-88   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g1671 i0 78.253 32.4703448275862 584 87 77 20 60 619 163 730 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 23541 339 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16084047 16084047 PRJNA797475_P_NODE_29613_length_242_cov_0.911243_g29514_i0 PRJNA797475 29613 242 0.911243 2.20520806 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 130 9.79e-26   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g29514 i0 90 52.7892561983471 100 10 41 0 78 177 5061 5160 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12775 130 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
27843435 27843435 PRJNA797475_P_NODE_12324_length_304_cov_1.333333_g12225_i0 PRJNA797475 12324 304 1.333333 4.05333232 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 132 1.01e-33   NR XP_013759182.1 461836 g12225 i0 64.6 0.976973684210526 99 33 97.7 1 8 304 306 402 XP_013759182.1 peptidase S8 and S53 domain-containing protein [Thecamonas trahens ATCC 50062] diamond 297 132 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31168607 31168607 PRJNA797475_P_NODE_23675_length_249_cov_0.875000_g23576_i0 PRJNA797475 23675 249 0.875 2.17875 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52 2.16e-5   NR XP_013760781.1 461836 g23576 i0 35.2 2.14457831325301 71 46 85.5 0 247 35 135 205 XP_013760781.1 uncharacterized protein AMSG_02228 [Thecamonas trahens ATCC 50062] diamond 534 52 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;