RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA796975" and tax_superkingdom = "Archaea"

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tax_kingdom 2

analysis 2

tax_superkingdom 1

  • Archaea · 2 ✖

bioproject 1

  • PRJNA796975 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12260733 12260733 PRJNA796975_S_NODE_4610_length_215_cov_6.271084_g4533_i0 PRJNA796975 4610 215 6.271084 13.4828306 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.019   NTclustered gi|323706731|gb|CP002529.1| 985053 g4533 i0 100 0.130232558139535 28 0 13 0 71 98 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
27686058 27686058 PRJNA796975_S_NODE_12284_length_164_cov_0.886957_g12207_i0 PRJNA796975 12284 164 0.886957 1.45460948 Promethearchaeota archaeon 2053489 Archaea Archaea 74.3 8.89e-14   NR NVM34348.1 2053489 g12207 i0 57.4 0.98780487804878 54 23 98.8 0 2 163 383 436 NVM34348.1 HAD-IA family hydrolase [Promethearchaeota archaeon] diamond 162 74.3 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;