RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA796975", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA796975 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26832419 26832419 PRJNA796975_S_NODE_12581_length_164_cov_0.886957_g12504_i0 PRJNA796975 12581 164 0.886957 1.45460948 Caldilineaceae bacterium 2614250 Bacteria Bacteria 94.7 4.5500000000000006e-21   NR MBP6440743.1 2614250 g12504 i0 79.6 1.9390243902439 54 11 98.8 0 2 163 272 325 MBP6440743.1 MBL fold metallo-hydrolase [Caldilineaceae bacterium] diamond 318 94.7 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
29927712 29927712 PRJNA796975_S_NODE_9771_length_167_cov_0.864407_g9694_i0 PRJNA796975 9771 167 0.864407 1.44355969 Candidatus Limnocylindrales bacterium 2952938 Bacteria Bacteria 97.1 1.6700000000000001e-22   NR HSH55421.1 2952938 g9694 i0 67.3 2.96407185628743 55 18 98.8 0 2 166 168 222 HSH55421.1 hypothetical protein [Candidatus Limnocylindrales bacterium] diamond 495 97.1 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria Candidatus Limnocylindrales     Candidatus Limnocylindrales bacterium
32614701 32614701 PRJNA796975_S_NODE_5520_length_202_cov_1.000000_g5443_i0 PRJNA796975 5520 202 1 2.02 Anaerolineales bacterium 2073117 Bacteria Bacteria 65.5 1.89e-10   NR HXQ32492.1 2073117 g5443 i0 55.4 0.965346534653465 65 27 93.6 2 200 12 212 276 HXQ32492.1 hypothetical protein [Anaerolineales bacterium] diamond 195 65.5 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;