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contig_metadata

3 rows where bioproject = "PRJNA796975" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

bioproject 1

  • PRJNA796975 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
781188 781188 PRJNA796975_S_NODE_15261_length_161_cov_0.910714_g15184_i0 PRJNA796975 15261 161 0.910714 1.46624954 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 298 1.56e-76   NTclustered gi|166046498|emb|CU367615.1| 100861 g15184 i0 100 99.8571428571429 161 0 100 0 1 161 366 526 Aphanomyces euteiches cDNA blastn 16077 298 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
12696464 12696464 PRJNA796975_S_NODE_10190_length_166_cov_1.307692_g10113_i0 PRJNA796975 10190 166 1.307692 2.17076872 root 1 Root_unresolved Root_unresolved 307 2.69e-79   NTclustered gi|2845540150|gb|PQ478072.1| 4796 g10113 i0 100 98.9096385542169 166 0 100 0 1 166 545 380 Phytophthora palmivora clone BAX_control_positivo_de_HR_donado BAX protein (BAX) gene, complete cds blastn 16419 307 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora palmivora
32045479 32045479 PRJNA796975_S_NODE_6218_length_194_cov_1.055172_g6141_i0 PRJNA796975 6218 194 1.055172 2.04703368 Cladocopium goreaui 2562237 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0146   NR CAL1130125.1 2562237 g6141 i0 35.1 0.881443298969072 57 35 88.1 1 7 177 33 87 CAL1130125.1 unnamed protein product [Cladocopium goreaui] diamond 171 43.1 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Cladocopium Cladocopium goreaui

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;