RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA796975" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA796975 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26864336 26864336 PRJNA796975_S_NODE_2461_length_274_cov_1.311111_g2384_i0 PRJNA796975 2461 274 1.311111 3.59244414 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 46.2 0.00316   NR MDO8340814.1 2026804 g2384 i0 83.3 0.262773722627737 24 4 26.3 0 4 75 397 420 MDO8340814.1 AAA family ATPase [Candidatus Woesebacteria bacterium] diamond 72 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
27622741 27622741 PRJNA796975_S_NODE_3804_length_230_cov_0.845304_g3727_i0 PRJNA796975 3804 230 0.84530400000000006 1.9441992 Candidatus Woesebacteria bacterium 2026804 Bacteria Bacteria 109 5.6800000000000006e-27   NR MDO8340819.1 2026804 g3727 i0 65.8 1.9695652173913 76 26 99.1 0 3 230 91 166 MDO8340819.1 AAA family ATPase [Candidatus Woesebacteria bacterium] diamond 453 109 1 Bacteria Bacteria candidate phyla   Candidatus Woeseibacteriota         Candidatus Woesebacteria bacterium
30622465 30622465 PRJNA796975_S_NODE_12293_length_164_cov_0.886957_g12216_i0 PRJNA796975 12293 164 0.886957 1.45460948 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 89.4 9.84e-20   NR HMH70276.1 2973664 g12216 i0 74.1 0.98780487804878 54 14 98.8 0 3 164 101 154 HMH70276.1 LssY C-terminal domain-containing protein [Candidatus Saccharimonadales bacterium] diamond 162 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
32425117 32425117 PRJNA796975_S_NODE_14379_length_162_cov_0.902655_g14302_i0 PRJNA796975 14379 162 0.902655 1.4623011 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 108 3.97e-27   NR MBB1555338.1 2026720 g14302 i0 92.6 1 54 4 100 0 162 1 32 85 MBB1555338.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 162 108 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32645844 32645844 PRJNA796975_S_NODE_14140_length_162_cov_0.902655_g14063_i0 PRJNA796975 14140 162 0.902655 1.4623011 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 71.6 8.08e-13   NR MDB5166727.1 2026720 g14063 i0 61.1 1 54 21 100 0 162 1 221 274 MDB5166727.1 Glutamyl-tRNA(Gln) amidotransferase subunit [Candidatus Saccharibacteria bacterium] diamond 162 71.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;