RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA796753", tax_phylum = "Promethearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Promethearchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA796753 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27306878 27306878 PRJNA796753_P_NODE_52723_length_242_cov_0.911243_g52411_i0 PRJNA796753 52723 242 0.911243 2.20520806 Promethearchaeota archaeon 2053489 Archaea Archaea 74.3 2.75e-13   NR TFG30161.1 2053489 g52411 i0 48.1 1.94628099173554 77 39 95.5 1 241 11 570 645 TFG30161.1 MAG: hypothetical protein EU532_01615 [Promethearchaeota archaeon] diamond 471 74.3 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
30970263 30970263 PRJNA796753_P_NODE_37914_length_253_cov_2.138889_g37602_i0 PRJNA796753 37914 253 2.138889 5.41138917 Promethearchaeota archaeon 2053489 Archaea Archaea 46.2 0.00218   NR MCK4381360.1 2053489 g37602 i0 57.6 0.391304347826087 33 14 39.1 0 248 150 235 267 MCK4381360.1 GTP-binding protein [Promethearchaeota archaeon] diamond 99 46.2 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
31516904 31516904 PRJNA796753_P_NODE_23176_length_310_cov_1.949367_g22864_i0 PRJNA796753 23176 310 1.949367 6.0430377 Candidatus Harpocratesius 3049169 Archaea Archaea 119 9e-31   NR MCF2141984.1 3049170 g22864 i0 61.8 2.8741935483871 102 38 98.7 1 5 310 1 101 MCF2141984.1 ribose 5-phosphate isomerase A [Candidatus Harpocratesius repetitus] diamond 891 119 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia Promethearchaeales Promethearchaeaceae Candidatus Harpocratesius Candidatus Harpocratesius repetitus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;