RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA796753", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Nitrososphaerota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA796753 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26927275 26927275 PRJNA796753_P_NODE_14462_length_374_cov_1.013289_g14150_i0 PRJNA796753 14462 374 1.013289 3.78970086 Nitrososphaerota archaeon 2026795 Archaea Archaea 77 1.53e-13   NR MDE1816823.1 2026795 g14150 i0 66.7 0.457219251336898 57 19 45.7 0 204 374 299 355 MDE1816823.1 reverse transcriptase family protein [Nitrososphaerota archaeon] diamond 171 77 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32235536 32235536 PRJNA796753_P_NODE_33938_length_267_cov_1.505155_g33626_i0 PRJNA796753 33938 267 1.505155 4.01876385 Nitrososphaera sp. 1971748 Archaea Archaea 43.1 0.035   NR HJS82439.1 1971748 g33626 i0 41.8 0.617977528089888 55 23 51.7 1 109 246 173 227 HJS82439.1 hypothetical protein [Nitrososphaera sp.] diamond 165 43.1 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;