RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA796753" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA796753 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29642936 29642936 PRJNA796753_P_NODE_24850_length_301_cov_1.350877_g24538_i0 PRJNA796753 24850 301 1.350877 4.06613977 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.1 0.00991   NR MFA6159073.1 2053589 g24538 i0 41.8 0.667774086378738 67 36 66.8 2 84 284 20 83 MFA6159073.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 201 43.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29936700 29936700 PRJNA796753_P_NODE_39851_length_251_cov_0.865169_g39539_i0 PRJNA796753 39851 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 111 5.880000000000001e-27   NR HZX00931.1 2053589 g39539 i0 60.2 3.95617529880478 83 28 99.2 1 251 3 90 167 HZX00931.1 serine hydroxymethyltransferase [Candidatus Paceibacterota bacterium] diamond 993 111 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30496338 30496338 PRJNA796753_P_NODE_39633_length_251_cov_0.865169_g39321_i0 PRJNA796753 39633 251 0.865169 2.17157419 Minisyncoccota bacterium 2053589 Bacteria Bacteria 52.4 1.5e-5   NR HEY4486934.1 2053589 g39321 i0 41.2 0.812749003984064 68 40 81.3 0 249 46 146 213 HEY4486934.1 ADP-ribosylglycohydrolase family protein [Candidatus Paceibacterota bacterium] diamond 204 52.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31548592 31548592 PRJNA796753_P_NODE_19516_length_333_cov_0.861538_g19204_i0 PRJNA796753 19516 333 0.861538 2.86892154 Bacteria 2 Bacteria Bacteria 86.3 5.5e-19   NR MBP9717216.1 2053589 g19204 i0 44.5 2.97297297297297 110 60 99.1 1 333 4 12 120 MBP9717216.1 tryptophan-rich sensory protein [Candidatus Paceibacterota bacterium] diamond 990 86.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;