contig_metadata
13 rows where bioproject = "PRJNA796753" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24168373 | 24168373 | PRJNA796753_P_NODE_49539_length_244_cov_0.900585_g49227_i0 | PRJNA796753 | 49539 | 244 | 0.900585 | 2.1974274 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 73.6 | 8.39e-14 | NR | MFI5209580.1 | 2448054 | g49227 | i0 | 50 | 6.66393442622951 | 62 | 31 | 76.2 | 0 | 243 | 58 | 145 | 206 | MFI5209580.1 sterol desaturase family protein [Gemmatimonadales bacterium] | diamond | 1626 | 73.6 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 26736905 | 26736905 | PRJNA796753_P_NODE_31741_length_274_cov_1.532338_g31429_i0 | PRJNA796753 | 31741 | 274 | 1.532338 | 4.19860612 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 62.8 | 3.29e-9 | NR | MEO7102292.1 | 2026741 | g31429 | i0 | 36.5 | 1.87226277372263 | 85 | 54 | 93.1 | 0 | 256 | 2 | 191 | 275 | MEO7102292.1 SDR family oxidoreductase [Gemmatimonadaceae bacterium] | diamond | 513 | 62.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 27085541 | 27085541 | PRJNA796753_P_NODE_31162_length_276_cov_1.384236_g30850_i0 | PRJNA796753 | 31162 | 276 | 1.384236 | 3.82049136 | Gemmatirosa sp. | 2510638 | Bacteria | Bacteria | 100 | 2.5399999999999994e-23 | NR | HEY0778131.1 | 2510638 | g30850 | i0 | 93.5 | 0.5 | 46 | 3 | 50 | 0 | 2 | 139 | 246 | 291 | HEY0778131.1 signal peptidase I [Gemmatirosa sp.] | diamond | 138 | 100 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa sp. | |
| 27433315 | 27433315 | PRJNA796753_P_NODE_15983_length_359_cov_1.076923_g15671_i0 | PRJNA796753 | 15983 | 359 | 1.076923 | 3.86615357 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 143 | 3.1899999999999997e-37 | NR | NNE08319.1 | 2026742 | g15671 | i0 | 55.3 | 0.952646239554318 | 114 | 49 | 95.3 | 1 | 2 | 343 | 215 | 326 | NNE08319.1 T9SS type A sorting domain-containing protein [Gemmatimonadota bacterium] | diamond | 342 | 143 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28199787 | 28199787 | PRJNA796753_P_NODE_25686_length_296_cov_1.726457_g25374_i0 | PRJNA796753 | 25686 | 296 | 1.726457 | 5.11031272 | FCB group | 1783270 | Bacteria | Bacteria | 67 | 1.23e-10 | NR | MCH7565339.1 | 2026742 | g25374 | i0 | 39.8 | 3.97297297297297 | 98 | 55 | 99.3 | 2 | 295 | 2 | 81 | 174 | MCH7565339.1 endo alpha-1,4 polygalactosaminidase [Gemmatimonadota bacterium] | diamond | 1176 | 67 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28547559 | 28547559 | PRJNA796753_P_NODE_4207_length_654_cov_1.595525_g3906_i0 | PRJNA796753 | 4207 | 654 | 1.595525 | 10.4347335 | Bacteria | 2 | Bacteria | Bacteria | 228 | 5.849999999999999e-72 | NR | WP_325311220.1 | 2029185 | g3906 | i0 | 55 | 3.88073394495413 | 211 | 92 | 95.9 | 2 | 28 | 654 | 2 | 211 | WP_325311220.1 NADPH-dependent F420 reductase [Longimicrobium sp.] | diamond | 2538 | 228 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 28885378 | 28885378 | PRJNA796753_P_NODE_15188_length_366_cov_1.576792_g14876_i0 | PRJNA796753 | 15188 | 366 | 1.576792 | 5.77105872 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 88.2 | 1.83e-17 | NR | MEJ2503434.1 | 2026742 | g14876 | i0 | 50 | 1.59836065573771 | 78 | 34 | 59.8 | 1 | 1 | 219 | 86 | 163 | MEJ2503434.1 trypsin-like peptidase domain-containing protein [Gemmatimonadota bacterium] | diamond | 585 | 88.2 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 28980416 | 28980416 | PRJNA796753_P_NODE_28788_length_284_cov_1.445498_g28476_i0 | PRJNA796753 | 28788 | 284 | 1.445498 | 4.10521432 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 92.8 | 1.17e-19 | NR | HEU4628557.1 | 2026741 | g28476 | i0 | 57.3 | 0.940140845070423 | 89 | 38 | 94 | 0 | 267 | 1 | 357 | 445 | HEU4628557.1 peptidoglycan DD-metalloendopeptidase family protein [Gemmatimonadaceae bacterium] | diamond | 267 | 92.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30243541 | 30243541 | PRJNA796753_P_NODE_25112_length_300_cov_0.881057_g24800_i0 | PRJNA796753 | 25112 | 300 | 0.881057 | 2.643171 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 47.8 | 9.21e-4 | NR | MBA3495578.1 | 2448054 | g24800 | i0 | 47.5 | 0.59 | 59 | 30 | 59 | 1 | 293 | 117 | 7 | 64 | MBA3495578.1 ferritin-like domain-containing protein [Gemmatimonadales bacterium] | diamond | 177 | 47.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30379317 | 30379317 | PRJNA796753_P_NODE_41192_length_250_cov_0.870056_g40880_i0 | PRJNA796753 | 41192 | 250 | 0.870056 | 2.17514 | Bacteria | 2 | Bacteria | Bacteria | 70.5 | 6.99e-12 | NR | HEX2723548.1 | 2026741 | g40880 | i0 | 44.2 | 3.684 | 77 | 40 | 88.8 | 1 | 23 | 244 | 649 | 725 | HEX2723548.1 protein kinase [Gemmatimonadaceae bacterium] | diamond | 921 | 70.9 | 0.994358251057828 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31349569 | 31349569 | PRJNA796753_P_NODE_52996_length_242_cov_0.911243_g52684_i0 | PRJNA796753 | 52996 | 242 | 0.911243 | 2.20520806 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 52.8 | 1.09e-5 | NR | HEY5415232.1 | 2026741 | g52684 | i0 | 37.3 | 1.69834710743802 | 75 | 46 | 91.7 | 1 | 236 | 15 | 632 | 706 | HEY5415232.1 BTAD domain-containing putative transcriptional regulator [Gemmatimonadaceae bacterium] | diamond | 411 | 52.8 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 31507755 | 31507755 | PRJNA796753_P_NODE_14676_length_371_cov_1.989933_g14364_i0 | PRJNA796753 | 14676 | 371 | 1.989933 | 7.38265143 | Longimicrobiales bacterium | 2910168 | Bacteria | Bacteria | 72.4 | 6.19e-12 | NR | MCJ7626881.1 | 2910168 | g14364 | i0 | 41.7 | 0.92991913746630706 | 115 | 58 | 92.2 | 5 | 368 | 27 | 390 | 496 | MCJ7626881.1 Ig-like domain-containing protein [Longimicrobiales bacterium] | diamond | 345 | 72.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 32771979 | 32771979 | PRJNA796753_P_NODE_39660_length_251_cov_0.865169_g39348_i0 | PRJNA796753 | 39660 | 251 | 0.865169 | 2.17157419 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 50.1 | 1.01e-4 | NR | MBT5449633.1 | 2026742 | g39348 | i0 | 62.2 | 0.442231075697211 | 37 | 14 | 44.2 | 0 | 8 | 118 | 39 | 75 | MBT5449633.1 SEL1-like repeat protein [Gemmatimonadota bacterium] | diamond | 111 | 50.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;