RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA796753" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27401648 27401648 PRJNA796753_P_NODE_36383_length_259_cov_1.241935_g36071_i0 PRJNA796753 36383 259 1.241935 3.21661165 Fidelibacterota bacterium 2026760 Bacteria Bacteria 85.1 4.28e-17   NR MEE9167109.1 2026760 g36071 i0 51.8 0.984555984555985 85 35 98.5 2 258 4 260 338 MEE9167109.1 ectonucleotide pyrophosphatase/phosphodiesterase [Fidelibacterota bacterium] diamond 255 85.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29485160 29485160 PRJNA796753_P_NODE_50210_length_244_cov_0.900585_g49898_i0 PRJNA796753 50210 244 0.900585 2.1974274 Fidelibacterota bacterium 2026760 Bacteria Bacteria 97.4 6.93e-22   NR MEC7848146.1 2026760 g49898 i0 64.4 6.66393442622951 73 26 89.8 0 3 221 82 154 MEC7848146.1 tryptophan 2,3-dioxygenase family protein [Fidelibacterota bacterium] diamond 1626 97.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30559149 30559149 PRJNA796753_P_NODE_27533_length_288_cov_1.432558_g27221_i0 PRJNA796753 27533 288 1.432558 4.12576704 Fidelibacterota bacterium 2026760 Bacteria Bacteria 68.2 7.02e-11   NR MDB3979887.1 2026760 g27221 i0 42.9 2.52083333333333 77 42 80.2 1 14 244 375 449 MDB3979887.1 hypothetical protein [Fidelibacterota bacterium] diamond 726 68.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;