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contig_metadata

12 rows where bioproject = "PRJNA796753" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA796753 · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3768413 3768413 PRJNA796753_P_NODE_35263_length_262_cov_1.873016_g34951_i0 PRJNA796753 35263 262 1.873016 4.90730192 Parachlamydiales 1963360 Bacteria Bacteria 129 4.67e-33   NR WP_032125010.1 389348 g34951 i0 78.7 7.78625954198473 75 16 85.9 0 262 38 215 289 WP_032125010.1 asparagine--tRNA ligase [Candidatus Protochlamydia naegleriophila] diamond 2040 130 0.992307692307692 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia naegleriophila
10984751 10984751 PRJNA796753_P_NODE_44369_length_248_cov_0.880000_g44057_i0 PRJNA796753 44369 248 0.88 2.1824 Chlamydia serpentis 1967782 Bacteria Bacteria 52.8 0.022   NTclustered gi|1376449303|emb|LT993738.1| 1967782 g44057 i0 100 0.112903225806452 28 0 11 0 128 155 72844 72817 Chlamydia sp. H15-1957-10C genome assembly, chromosome: I blastn 28 52.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia serpentis
13534496 13534496 PRJNA796753_P_NODE_51331_length_243_cov_0.905882_g51019_i0 PRJNA796753 51331 243 0.905882 2.20129326 Chlamydiia 204429 Bacteria Bacteria 129 3.16e-34   NR PIS01434.1 1973935 g51019 i0 75 13.6666666666667 80 20 98.8 0 2 241 122 201 PIS01434.1 MAG: transaldolase [Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9] diamond 3321 130 0.992307692307692 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium CG10_big_fil_rev_8_21_14_0_10_35_9
28380274 28380274 PRJNA796753_P_NODE_15586_length_362_cov_2.820069_g15274_i0 PRJNA796753 15586 362 2.820069 10.20864978 Estrella lausannensis 483423 Bacteria Bacteria 48.9 3.33e-4   NR WP_098037980.1 483423 g15274 i0 32.6 1.64917127071823 95 63 77.9 1 318 37 35 129 WP_098037980.1 Dps family protein [Estrella lausannensis] diamond 597 48.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Estrella Estrella lausannensis
28601425 28601425 PRJNA796753_P_NODE_28827_length_284_cov_1.303318_g28515_i0 PRJNA796753 28827 284 1.303318 3.70142312 Chlamydiia bacterium 2052156 Bacteria Bacteria 45.1 0.00888   NR MCB1111823.1 2052156 g28515 i0 29.7 0.78169014084507 74 52 78.2 0 222 1 299 372 MCB1111823.1 nucleoside hydrolase [Chlamydiia bacterium] diamond 222 45.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
29611385 29611385 PRJNA796753_P_NODE_33430_length_269_cov_1.178571_g33118_i0 PRJNA796753 33430 269 1.178571 3.17035599 Chlamydiia bacterium 2052156 Bacteria Bacteria 96.7 1.98e-21   NR MCB1111560.1 2052156 g33118 i0 55.7 0.981412639405205 88 38 98.1 1 266 3 222 308 MCB1111560.1 dihydroorotate dehydrogenase [Chlamydiia bacterium] diamond 264 96.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
29896000 29896000 PRJNA796753_P_NODE_12111_length_402_cov_2.765957_g11799_i0 PRJNA796753 12111 402 2.7659570000000002 11.11914714 Chlamydiales bacterium 2047757 Bacteria Bacteria 142 2.86e-40   NR MCP5470420.1 2047757 g11799 i0 82.1 0.582089552238806 78 14 58.2 0 401 168 2 79 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 234 142 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
30717236 30717236 PRJNA796753_P_NODE_2954_length_770_cov_1.810617_g2679_i0 PRJNA796753 2954 770 1.810617 13.9417509 Simkania sp. 34094 Bacteria Bacteria 250 1.11e-79   NR MCB1084310.1 34094 g2679 i0 67.9 0.751948051948052 193 62 75.2 0 50 628 1 193 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 579 250 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
30907162 30907162 PRJNA796753_P_NODE_40734_length_250_cov_0.870056_g40422_i0 PRJNA796753 40734 250 0.870056 2.17514 Chlamydia sp. 32-24 1895742 Bacteria Bacteria 55.1 1.2e-6   NR OJU81840.1 1895742 g40422 i0 47.3 3.876 55 27 63.6 1 91 249 15 69 OJU81840.1 MAG: hypothetical protein BGO10_08110 [Chlamydia sp. 32-24] diamond 969 55.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Chlamydiaceae Chlamydia Chlamydia sp. 32-24
31381233 31381233 PRJNA796753_P_NODE_23536_length_308_cov_1.855319_g23224_i0 PRJNA796753 23536 308 1.855319 5.71438252 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 85.9 5.46e-19   NR QLH37614.1 2052176 g23224 i0 50 0.818181818181818 84 35 75 1 296 66 40 123 QLH37614.1 MAG: Helicase associated domain protein [Parachlamydiaceae bacterium] diamond 252 85.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
31792047 31792047 PRJNA796753_P_NODE_51197_length_243_cov_0.905882_g50885_i0 PRJNA796753 51197 243 0.905882 2.20129326 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 64.3 2.8e-10   NR MBA3958664.1 2052176 g50885 i0 44.9 0.851851851851852 69 36 85.2 1 211 5 8 74 MBA3958664.1 SAM-dependent methyltransferase [Parachlamydiaceae bacterium] diamond 207 64.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
32803490 32803490 PRJNA796753_P_NODE_29580_length_281_cov_1.730769_g29268_i0 PRJNA796753 29580 281 1.730769 4.86346089 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 60.8 2.39e-9   NR QLH37614.1 2052176 g29268 i0 54.4 0.608540925266904 57 25 60.9 1 109 279 27 82 QLH37614.1 MAG: Helicase associated domain protein [Parachlamydiaceae bacterium] diamond 171 60.8 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;