RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA796753", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA796753 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28127838 28127838 PRJNA796753_P_NODE_35145_length_263_cov_1.215789_g34833_i0 PRJNA796753 35145 263 1.215789 3.19752507 Vittaforma corneae ATCC 5 42399 Fungi Fungi 74.3 1.41e-14   NR XP_007604594.1 993615 g34833 i0 38.8 0.96958174904943 85 52 97 0 261 7 38 122 XP_007604594.1 uncharacterized protein VICG_01148 [Vittaforma corneae ATCC 50505] diamond 255 74.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
28862942 28862942 PRJNA796753_P_NODE_53768_length_241_cov_0.916667_g53456_i0 PRJNA796753 53768 241 0.916667 2.20916747 root 1 Root_unresolved Root_unresolved 67.8 1.01e-12   NR RVD90725.1 291195 g53456 i0 41.9 1.85477178423237 74 43 92.1 0 11 232 11 84 RVD90725.1 glutaredoxin [Tubulinosema ratisbonensis] diamond 447 67.8 1 Eukaryota Opisthokonta Fungi Microsporidia     Tubulinosematidae Tubulinosema Tubulinosema ratisbonensis
29201376 29201376 PRJNA796753_P_NODE_32149_length_273_cov_1.240000_g31837_i0 PRJNA796753 32149 273 1.24 3.3852 Nosema bombycis CQ1 578461 Fungi Fungi 43.5 0.0276   NR EOB14634.1 578461 g31837 i0 41.7 0.659340659340659 60 33 65.9 2 39 218 259 316 EOB14634.1 Glucose-repressible alcohol dehydrogenase transcriptional effector [Nosema bombycis CQ1] diamond 180 43.5 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;