RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA796753", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA796753 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25443514 25443514 PRJNA796753_P_NODE_48900_length_245_cov_0.895349_g48588_i0 PRJNA796753 48900 245 0.895349 2.19360505 Mesoplasma 46239 Bacteria Bacteria 52.8 0.022   NTclustered gi|1359431967|gb|CP022506.1| 2151 g48588 i0 100 0.457142857142857 28 0 11 0 154 181 755002 755029 Mesoplasma florum strain W20 chromosome blastn 112 52.8 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Entomoplasmatales Entomoplasmataceae Mesoplasma Mesoplasma florum
27852604 27852604 PRJNA796753_P_NODE_26024_length_294_cov_2.714932_g25712_i0 PRJNA796753 26024 294 2.714932 7.98190008 PVC group 1783257 Bacteria Bacteria 121 9.589999999999999e-30   NR PKK95389.1 2013848 g25712 i0 60.4 2.86734693877551 91 33 92.9 2 273 1 479 566 PKK95389.1 MAG: phosphoenolpyruvate carboxykinase (GTP) [Tenericutes bacterium HGW-Tenericutes-5] diamond 843 122 0.991803278688525 Bacteria   Bacillati Mycoplasmatota         Tenericutes bacterium HGW-Tenericutes-5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;