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contig_metadata

31 rows where bioproject = "PRJNA796753", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 31 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 31 ✖

bioproject 1

  • PRJNA796753 · 31 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6320656 6320656 PRJNA796753_P_NODE_10225_length_433_cov_1.666667_g9913_i0 PRJNA796753 10225 433 1.666667 7.21666811 Pseudomonadati 3379134 Bacteria Bacteria 776 0   NTclustered gi|2874253974|emb|OY970299.1| 412056 g9913 i0 99.074 103.956120092379 432 4 99 0 2 433 1259025 1258594 MAG: uncultured Verrucomicrobiae bacterium isolate MFD09603.bin.1.43 genome assembly, chromosome: 1 blastn 45013 776 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
27220768 27220768 PRJNA796753_P_NODE_8562_length_469_cov_1.250000_g8251_i0 PRJNA796753 8562 469 1.25 5.8625 Pseudomonadati 3379134 Bacteria Bacteria 53.5 7.9e-6   NR MAM91068.1 2006848 g8251 i0 67.4 0.997867803837953 43 14 27.5 0 437 309 78 120 MAM91068.1 hypothetical protein [Opitutaceae bacterium] diamond 468 53.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
27243484 27243484 PRJNA796753_P_NODE_36943_length_257_cov_1.255435_g36631_i0 PRJNA796753 36943 257 1.255435 3.22646795 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 89.4 1.27e-20   NR MBS0628243.1 2026799 g36631 i0 45.7 1.07392996108949 92 43 99.2 1 3 257 37 128 MBS0628243.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 276 89.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27252549 27252549 PRJNA796753_P_NODE_1303_length_1074_cov_2.181818_g1117_i0 PRJNA796753 1303 1074 2.181818 23.43272532 root 1 Root_unresolved Root_unresolved 379 6.68e-127   NR HUL51663.1 2499141 g1117 i0 55.4 14.195530726257 336 135 93.9 2 1008 1 49 369 HUL51663.1 multicopper oxidase domain-containing protein [Verrucomicrobiia bacterium] diamond 15246 381 0.994750656167979 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
27338446 27338446 PRJNA796753_P_NODE_38683_length_251_cov_1.320225_g38371_i0 PRJNA796753 38683 251 1.320225 3.31376475 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 46.6 0.00168   NR MBA2744424.1 2201154 g38371 i0 33.3 0.860557768924303 72 42 83.7 3 12 221 24 91 MBA2744424.1 EamA family transporter RarD [Chthoniobacterales bacterium] diamond 216 46.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
27654280 27654280 PRJNA796753_P_NODE_21664_length_319_cov_1.252033_g21352_i0 PRJNA796753 21664 319 1.252033 3.99398527 Opitutaceae bacterium 2006848 Bacteria Bacteria 82.8 6.72e-18   NR HTX65662.1 2006848 g21352 i0 41.6 2.8025078369906 101 57 95 2 14 316 1 99 HTX65662.1 phenylpyruvate tautomerase MIF-related protein [Opitutaceae bacterium] diamond 894 83.2 0.995192307692308 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
27758288 27758288 PRJNA796753_P_NODE_40644_length_250_cov_0.870056_g40332_i0 PRJNA796753 40644 250 0.870056 2.17514 Pseudomonadati 3379134 Bacteria Bacteria 104 8.76e-24   NR MBP6785497.1 2026801 g40332 i0 54.2 17.7 83 38 99.6 0 249 1 617 699 MBP6785497.1 2-oxoglutarate dehydrogenase E1 component [Verrucomicrobiales bacterium] diamond 4425 105 0.990476190476191 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28096137 28096137 PRJNA796753_P_NODE_32125_length_273_cov_1.330000_g31813_i0 PRJNA796753 32125 273 1.33 3.6309 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.0109   NR PYJ55986.1 2026799 g31813 i0 43.5 1.36263736263736 62 30 67 2 212 30 55 112 PYJ55986.1 MAG: hypothetical protein DME24_23605 [Verrucomicrobiota bacterium] diamond 372 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28168478 28168478 PRJNA796753_P_NODE_945_length_1211_cov_5.935852_g787_i0 PRJNA796753 945 1211 5.935852 71.88316772 Bacteria 2 Bacteria Bacteria 61.2 4.08e-6   NR MCX6884131.1 2026799 g787 i0 30.5 0.656482246077622 128 84 30.7 2 600 229 44 170 MCX6884131.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 795 61.6 0.993506493506494 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28790641 28790641 PRJNA796753_P_NODE_41247_length_250_cov_0.870056_g40935_i0 PRJNA796753 41247 250 0.870056 2.17514 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 47.8 7.01e-4   NR MEI6392991.1 2026799 g40935 i0 46.3 1.62 67 34 79.2 2 39 236 656 721 MEI6392991.1 tandem-95 repeat protein [Verrucomicrobiota bacterium] diamond 405 47.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
28790657 28790657 PRJNA796753_P_NODE_8227_length_478_cov_2.617284_g7916_i0 PRJNA796753 8227 478 2.617284 12.51061752 Verrucomicrobiia bacterium DG1235 382464 Bacteria Bacteria 49.7 0.00117   NR EDY81443.1 382464 g7916 i0 37.6 0.684100418410042 109 60 68.4 3 114 440 170 270 EDY81443.1 hypothetical protein VDG1235_1061 [Verrucomicrobiia bacterium DG1235] diamond 327 49.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium DG1235
28831372 28831372 PRJNA796753_P_NODE_28228_length_286_cov_1.239437_g27916_i0 PRJNA796753 28228 286 1.239437 3.54478982 Verrucomicrobiota 74201 Bacteria Bacteria 67.8 9.8e-11   NR MBL9146839.1 2026800 g27916 i0 43.4 5.39160839160839 83 46 87.1 1 251 3 534 615 MBL9146839.1 cadherin-like beta sandwich domain-containing protein [Verrucomicrobiaceae bacterium] diamond 1542 67.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
29241950 29241950 PRJNA796753_P_NODE_38849_length_251_cov_0.865169_g38537_i0 PRJNA796753 38849 251 0.865169 2.17157419 Haloferula 574899 Bacteria Bacteria 44.3 0.0116   NR MDP0489535.1 3064552 g38537 i0 42 1.13545816733068 50 29 59.8 0 192 43 484 533 MDP0489535.1 cytochrome c oxidase subunit 3 [Verrucomicrobiota bacterium JB023] diamond 285 44.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium JB023
29516856 29516856 PRJNA796753_P_NODE_47910_length_245_cov_0.895349_g47598_i0 PRJNA796753 47910 245 0.895349 2.19360505 Opitutales bacterium 2026772 Bacteria Bacteria 124 1.2e-33   NR MBR7105360.1 2026772 g47598 i0 96.8 0.759183673469388 62 2 75.9 0 186 1 54 115 MBR7105360.1 hypothetical protein [Opitutales bacterium] diamond 186 124 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
29959055 29959055 PRJNA796753_P_NODE_29031_length_283_cov_1.466667_g28719_i0 PRJNA796753 29031 283 1.466667 4.15066761 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 85.1 3.58e-18   NR MEO8204849.1 2201154 g28719 i0 48.8 3.61484098939929 84 43 89 0 252 1 40 123 MEO8204849.1 superoxide dismutase family protein [Chthoniobacterales bacterium] diamond 1023 85.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
30654068 30654068 PRJNA796753_P_NODE_48033_length_245_cov_0.895349_g47721_i0 PRJNA796753 48033 245 0.895349 2.19360505 Luteolibacter sp. Populi 3230487 Bacteria Bacteria 155 1.25e-41   NR WP_367873923.1 3230487 g47721 i0 86.4 0.991836734693878 81 11 99.2 0 245 3 2319 2399 WP_367873923.1 InlB B-repeat-containing protein [Luteolibacter sp. Populi] diamond 243 155 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp. Populi
30685662 30685662 PRJNA796753_P_NODE_9293_length_453_cov_1.215789_g8981_i0 PRJNA796753 9293 453 1.215789 5.50752417 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 207 2.04e-60   NR RYD77759.1 2026800 g8981 i0 68.2 1 151 48 100 0 1 453 227 377 RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium] diamond 453 207 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
30884460 30884460 PRJNA796753_P_NODE_54034_length_241_cov_0.916667_g53722_i0 PRJNA796753 54034 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 114 4.69e-28   NR MBS0620626.1 2026799 g53722 i0 72.5 4.9792531120332 80 22 99.6 0 240 1 91 170 MBS0620626.1 tRNA-guanosine(34) transglycosylase [Verrucomicrobiota bacterium] diamond 1200 115 0.991304347826087 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31033634 31033634 PRJNA796753_P_NODE_4175_length_656_cov_3.298456_g3875_i0 PRJNA796753 4175 656 3.298456 21.63787136 Opitutales bacterium 2026772 Bacteria Bacteria 77.8 5.88e-14   NR MDB2357976.1 2026772 g3875 i0 36.8 0.621951219512195 136 80 59.5 3 121 510 23 158 MDB2357976.1 phage tail tip lysozyme [Opitutales bacterium] diamond 408 77.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
31168598 31168598 PRJNA796753_P_NODE_54215_length_241_cov_0.916667_g53903_i0 PRJNA796753 54215 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 92 5.03e-20   NR MBV9617568.1 2026799 g53903 i0 62.2 11.2033195020747 74 27 92.1 1 3 224 191 263 MBV9617568.1 alcohol dehydrogenase catalytic domain-containing protein [Verrucomicrobiota bacterium] diamond 2700 92 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31317743 31317743 PRJNA796753_P_NODE_12975_length_390_cov_1.902208_g12663_i0 PRJNA796753 12975 390 1.902208 7.4186112 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.0219   NR MEI6341235.1 2026799 g12663 i0 37.9 0.446153846153846 58 34 43.1 1 134 301 109 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 174 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31539334 31539334 PRJNA796753_P_NODE_30996_length_276_cov_3.206897_g30684_i0 PRJNA796753 30996 276 3.206897 8.85103572 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 43.1 0.0276   NR MEI6341235.1 2026799 g30684 i0 37.3 0.815217391304348 75 38 71.7 2 69 266 84 158 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 225 43.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31571040 31571040 PRJNA796753_P_NODE_50936_length_243_cov_0.905882_g50624_i0 PRJNA796753 50936 243 0.905882 2.20129326 Verrucomicrobiia bacterium 2499141 Bacteria Bacteria 66.2 1.79e-10   NR MCW5557519.1 2499141 g50624 i0 48.5 3.60493827160494 68 32 84 1 210 7 3 67 MCW5557519.1 patatin-like phospholipase family protein [Verrucomicrobiia bacterium] diamond 876 66.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       Verrucomicrobiia bacterium
31611653 31611653 PRJNA796753_P_NODE_20356_length_327_cov_1.212598_g20044_i0 PRJNA796753 20356 327 1.212598 3.96519546 Bacteria 2 Bacteria Bacteria 52 5.4e-5   NR MDX2185718.1 2006848 g20044 i0 37.3 2.88073394495413 83 51 76.1 1 9 257 454 535 MDX2185718.1 mucoidy inhibitor MuiA family protein [Opitutaceae bacterium] diamond 942 52.4 0.99236641221374 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31760542 31760542 PRJNA796753_P_NODE_1177_length_1118_cov_2.794258_g1000_i0 PRJNA796753 1177 1118 2.794258 31.23980444 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 53.9 6.43e-4   NR MEM7396574.1 2026799 g1000 i0 29 0.711091234347048 138 92 35.7 3 553 155 205 341 MEM7396574.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 795 53.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31959496 31959496 PRJNA796753_P_NODE_31217_length_276_cov_1.137931_g30905_i0 PRJNA796753 31217 276 1.137931 3.14068956 Verrucomicrobiota 74201 Bacteria Bacteria 103 1.16e-23   NR MBU3664440.1 2201154 g30905 i0 58.1 4.72826086956522 86 36 93.5 0 259 2 94 179 MBU3664440.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Chthoniobacterales bacterium] diamond 1305 103 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32045458 32045458 PRJNA796753_P_NODE_50898_length_243_cov_0.905882_g50586_i0 PRJNA796753 50898 243 0.905882 2.20129326 Opitutaceae bacterium 2006848 Bacteria Bacteria 47 0.00117   NR MBX3749245.1 2006848 g50586 i0 52.3 2.51851851851852 44 19 54.3 1 230 99 62 103 MBX3749245.1 hypothetical protein [Opitutaceae bacterium] diamond 612 47 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
32425095 32425095 PRJNA796753_P_NODE_32919_length_270_cov_2.131980_g32607_i0 PRJNA796753 32919 270 2.13198 5.756346 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 42.7 0.0359   NR MEI6341235.1 2026799 g32607 i0 34.9 0.922222222222222 83 45 82.2 2 45 266 84 166 MEI6341235.1 permease prefix domain 1-containing protein [Verrucomicrobiota bacterium] diamond 249 42.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32592356 32592356 PRJNA796753_P_NODE_31659_length_274_cov_1.915423_g31347_i0 PRJNA796753 31659 274 1.915423 5.24825902 Bacteria 2 Bacteria Bacteria 48.1 7.01e-4   NR MCD6338362.1 2026799 g31347 i0 29.2 1.51094890510949 89 50 97.4 3 270 4 439 514 MCD6338362.1 tandem-95 repeat protein [Verrucomicrobiota bacterium] diamond 414 48.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32709053 32709053 PRJNA796753_P_NODE_8720_length_465_cov_2.747449_g8409_i0 PRJNA796753 8720 465 2.747449 12.77563785 Limisphaerales bacterium 2052186 Bacteria Bacteria 53.1 8.87e-5   NR MFN3408655.1 2052186 g8409 i0 34.6 1.03225806451613 81 50 50.3 3 461 228 169 249 MFN3408655.1 LamG-like jellyroll fold domain-containing protein [Limisphaerales bacterium] diamond 480 53.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales     Limisphaerales bacterium
32780991 32780991 PRJNA796753_P_NODE_33080_length_270_cov_1.228426_g32768_i0 PRJNA796753 33080 270 1.228426 3.3167502 Verrucomicrobium 2735 Bacteria Bacteria 135 8.65e-36   NR HSJ01278.1 72225 g32768 i0 70.7 10.1444444444444 82 24 91.1 0 258 13 194 275 HSJ01278.1 phosphoenolpyruvate carboxykinase (GTP) [Verrucomicrobium sp.] diamond 2739 136 0.992647058823529 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Verrucomicrobium Verrucomicrobium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;