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contig_metadata

9 rows where bioproject = "PRJNA796753", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 9 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 9 ✖

bioproject 1

  • PRJNA796753 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
780823 780823 PRJNA796753_P_NODE_54301_length_241_cov_0.916667_g53989_i0 PRJNA796753 54301 241 0.916667 2.20916747 Omnitrophica bacterium GWA2_52_8 1801817 Bacteria Bacteria 60.5 7.29e-10   NR OGW80114.1 1801817 g53989 i0 38.8 6.09958506224066 67 40 83.4 1 41 241 4 69 OGW80114.1 MAG: glutaredoxin 3 [Omnitrophica bacterium GWA2_52_8] diamond 1470 60.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Omnitrophica bacterium GWA2_52_8
21183228 21183228 PRJNA796753_P_NODE_43017_length_249_cov_0.875000_g42705_i0 PRJNA796753 43017 249 0.875 2.17875 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 140 3.1299999999999997e-37   NR MBN2328506.1 2035772 g42705 i0 85.4 9.31325301204819 82 12 98.8 0 247 2 303 384 MBN2328506.1 glutamine-hydrolyzing GMP synthase [Candidatus Omnitrophota bacterium] diamond 2319 140 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
26673657 26673657 PRJNA796753_P_NODE_18901_length_337_cov_0.875000_g18589_i0 PRJNA796753 18901 337 0.875 2.94875 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 55.1 5.37e-6   NR MBI3615942.1 2035772 g18589 i0 40.6 0.56973293768546 64 38 57 0 336 145 951 1014 MBI3615942.1 ATP-dependent helicase [Candidatus Omnitrophota bacterium] diamond 192 55.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
27180065 27180065 PRJNA796753_P_NODE_9242_length_454_cov_1.514436_g8930_i0 PRJNA796753 9242 454 1.514436 6.87553944 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 82.8 4.05e-15   NR MCM8786833.1 2035772 g8930 i0 41.3 0.720264317180617 109 60 71.4 3 453 130 381 486 MCM8786833.1 LamG domain-containing protein [Candidatus Omnitrophota bacterium] diamond 327 82.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
28727669 28727669 PRJNA796753_P_NODE_22787_length_313_cov_0.858333_g22475_i0 PRJNA796753 22787 313 0.858333 2.68658229 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42.7 0.0347   NR MDD5070811.1 2035772 g22475 i0 28.2 0.987220447284345 103 67 95.8 3 12 311 39 137 MDD5070811.1 CBS domain-containing protein [Candidatus Omnitrophota bacterium] diamond 309 42.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29642942 29642942 PRJNA796753_P_NODE_29570_length_281_cov_1.850962_g29258_i0 PRJNA796753 29570 281 1.850962 5.20120322 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 47.4 0.00145   NR MEW6234251.1 2035772 g29258 i0 54.3 0.373665480427046 35 16 37.4 0 266 162 2628 2662 MEW6234251.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 105 47.4 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30370257 30370257 PRJNA796753_P_NODE_21772_length_318_cov_1.885714_g21460_i0 PRJNA796753 21772 318 1.885714 5.99657052 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 63.5 4.6e-9   NR MFH1855929.1 2035772 g21460 i0 41.9 0.811320754716981 86 49 80.2 1 5 259 1822 1907 MFH1855929.1 CARDB domain-containing protein [Candidatus Omnitrophota bacterium] diamond 258 63.5 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30442261 30442261 PRJNA796753_P_NODE_29093_length_283_cov_1.452381_g28781_i0 PRJNA796753 29093 283 1.452381 4.11023823 PVC group 1783257 Bacteria Bacteria 59.7 5.92e-8   NR RJP28557.1 2035772 g28781 i0 38.7 9.8904593639576 75 44 78.4 2 224 3 173 246 RJP28557.1 MAG: 2-aminoethylphosphonate--pyruvate transaminase [Candidatus Omnitrophota bacterium] diamond 2799 59.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
32456867 32456867 PRJNA796753_P_NODE_3859_length_680_cov_1.331137_g3563_i0 PRJNA796753 3859 680 1.331137 9.0517316 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 179 1.8e-52   NR HOD11611.1 2035772 g3563 i0 49.5 1.64558823529412 186 92 82.1 1 673 116 58 241 HOD11611.1 3-deoxy-manno-octulosonate cytidylyltransferase [Candidatus Omnitrophota bacterium] diamond 1119 179 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;