RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA796753", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA796753 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30211670 30211670 PRJNA796753_P_NODE_38992_length_251_cov_0.865169_g38680_i0 PRJNA796753 38992 251 0.865169 2.17157419 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 57.4 2.9e-7   NR MBL7648821.1 2030809 g38680 i0 43.5 2.98804780876494 85 42 95.6 5 249 10 406 489 MBL7648821.1 exo-alpha-sialidase [Candidatus Hydrogenedentota bacterium] diamond 750 57.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
31349558 31349558 PRJNA796753_P_NODE_45376_length_247_cov_0.885057_g45064_i0 PRJNA796753 45376 247 0.885057 2.18609079 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 98.2 2.32e-22   NR HNR30730.1 2030809 g45064 i0 55.4 5.04048582995951 83 34 97.2 1 3 242 190 272 HNR30730.1 metallophosphoesterase family protein [Candidatus Hydrogenedentota bacterium] diamond 1245 98.2 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;