RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA796753", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA796753 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16083164 16083164 PRJNA796753_P_NODE_20973_length_323_cov_1.624000_g20661_i0 PRJNA796753 20973 323 1.624 5.24552 FCB group 1783270 Bacteria Bacteria 161 2.44e-45   NR MAO66699.1 2024824 g20661 i0 66.4 8.07120743034056 107 36 99.4 0 1 321 228 334 MAO66699.1 fumarylacetoacetase [Balneola sp.] diamond 2607 162 0.993827160493827 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
30694850 30694850 PRJNA796753_P_NODE_40473_length_250_cov_0.870056_g40161_i0 PRJNA796753 40473 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 123 5.609999999999999e-31   NR WP_114984459.1 1457365 g40161 i0 64.6 15.66 82 29 98.4 0 247 2 92 173 WP_114984459.1 alpha,alpha-trehalase TreF [Cyclonatronum proteinivorum] diamond 3915 124 0.991935483870968 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum proteinivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;