RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA796639", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 3 ✖

tax_phylum 1

  • Acidobacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA796639 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27306834 27306834 PRJNA796639_P_NODE_7543_length_242_cov_0.911243_g7418_i0 PRJNA796639 7543 242 0.911243 2.20520806 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 52.8 1.01e-5   NR HEX2122551.1 2651171 g7418 i0 41.7 1.48760330578512 60 33 74.4 1 186 7 66 123 HEX2122551.1 serine/threonine-protein kinase [Thermoanaerobaculia bacterium] diamond 360 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
27338412 27338412 PRJNA796639_P_NODE_7283_length_243_cov_1.441176_g7158_i0 PRJNA796639 7283 243 1.441176 3.50205768 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 43.1 0.0262   NR HWG18504.1 2052142 g7158 i0 31.9 0.851851851851852 69 33 67.9 1 26 190 70 138 HWG18504.1 hypothetical protein [Acidobacteriaceae bacterium] diamond 207 43.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
29611366 29611366 PRJNA796639_P_NODE_2590_length_349_cov_3.514493_g2465_i0 PRJNA796639 2590 349 3.514493 12.26558057 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 46.6 0.00535   NR MEQ1729317.1 2910147 g2465 i0 28.3 0.790830945558739 92 52 71.3 2 56 304 268 354 MEQ1729317.1 glycosyltransferase family 39 protein [Vicinamibacterales bacterium] diamond 276 46.6 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;