RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA796639", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA796639 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26927270 26927270 PRJNA796639_P_NODE_2262_length_371_cov_3.457912_g2137_i0 PRJNA796639 2262 371 3.457912 12.82885352 Ancylostoma ceylanicum 53326 Nematoda Nematoda 43.1 0.0326   NR EYC22811.1 53326 g2137 i0 42.2 0.363881401617251 45 26 36.4 0 119 253 49 93 EYC22811.1 hypothetical protein Y032_0016g2965 [Ancylostoma ceylanicum] diamond 135 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
28380263 28380263 PRJNA796639_P_NODE_5926_length_250_cov_0.593220_g5801_i0 PRJNA796639 5926 250 0.59322 1.48305 Ancylostoma ceylanicum 53326 Nematoda Nematoda 41.6 0.0404   NR EYC22811.1 53326 g5801 i0 42.2 0.54 45 26 54 0 101 235 49 93 EYC22811.1 hypothetical protein Y032_0016g2965 [Ancylostoma ceylanicum] diamond 135 41.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;