RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA796639" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA796639 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14809083 14809083 PRJNA796639_P_NODE_5632_length_251_cov_0.865169_g5507_i0 PRJNA796639 5632 251 0.865169 2.17157419 Crocosphaera subtropica 2546360 Bacteria Bacteria 52.8 0.023   NTclustered gi|171696371|gb|CP000806.1| 43989 g5507 i0 100 0.111553784860558 28 0 11 0 24 51 2156137 2156164 Cyanothece sp. ATCC 51142 circular chromosome, complete sequence blastn 28 52.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Aphanothecaceae Crocosphaera Crocosphaera subtropica
28096114 28096114 PRJNA796639_P_NODE_4865_length_267_cov_1.319588_g4740_i0 PRJNA796639 4865 267 1.319588 3.52329996 Synechococcus sp. Nb3U1 1914529 Bacteria Bacteria 43.9 0.0159   NR WP_235278608.1 1914529 g4740 i0 39.7 0.820224719101124 73 36 73 3 55 249 67 139 WP_235278608.1 hypothetical protein [Synechococcus sp. Nb3U1] diamond 219 43.9 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Synechococcus Synechococcus sp. Nb3U1
32425069 32425069 PRJNA796639_P_NODE_7279_length_243_cov_1.500000_g7154_i0 PRJNA796639 7279 243 1.5 3.645 Cyanobacteriota bacterium 2847862 Bacteria Bacteria 44.7 0.0072   NR MFN6337432.1 2847862 g7154 i0 41.5 0.506172839506173 41 23 49.4 1 5 124 92 132 MFN6337432.1 4a-hydroxytetrahydrobiopterin dehydratase [Cyanobacteriota bacterium] diamond 123 44.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;